Brevundimonas pondensis: IFE19_01110
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Entry
IFE19_01110 CDS
T07639
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
bpon
Brevundimonas pondensis
Brite
KEGG Orthology (KO) [BR:
bpon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpon03016
]
IFE19_01110 (truA)
Enzymes [BR:
bpon01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
IFE19_01110 (truA)
Transfer RNA biogenesis [BR:
bpon03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IFE19_01110 (truA)
Prokaryotic type
IFE19_01110 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
QTC88036
UniProt:
A0ABX7SNS1
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All DBs
Position
complement(210269..211018)
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AA seq
249 aa
AA seq
DB search
MPRYRFTVEYDGSAYNGFQAQAGQPTVQGAIETAVTAFSGQTVRIAAAGRTDTGVHATGQ
TCHVDLDKEWPARTVMNALNAHLMHEAVAVLDCAPVSDDWHARFTANGRKYLYRILNRPG
RPALDRGRVWHVKKPLDAEAMHAAAQALIGLHDFTTFRDAQCQSASPVKTLDVARVSRVG
EEVHLVFEARSFLHRQVRSMAGSLAEVGLGRWSVSDLADALAAKDRAQCGPVAPSDGLYL
TGVTYETEA
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgccccgctaccgcttcacggtcgagtacgacggatcagcttacaacggctttcaagcc
caggcaggccagccgacggtgcagggcgcgatcgagacggcggtgacggccttttccggc
cagaccgtgcgcatcgccgccgccgggcgcaccgacaccggcgtccacgccacgggccag
acctgccatgtcgatctggacaaggagtggccggcgcggacggtgatgaacgccctgaac
gcccatctgatgcacgaggcggtggcggtgctggactgcgccccggtcagcgacgactgg
cacgcccgcttcaccgccaatgggcgcaaatatctgtatcgcatcctcaaccgtcccggc
cgtccggcgttggaccggggccgggtctggcacgtcaagaagccgctggacgccgaggcc
atgcatgcggcggcgcaggccctgatcggcctgcacgacttcaccaccttccgcgacgcc
cagtgccagtcggccagtccggtcaagactctggacgtggcgcgcgtcagccgtgtcggc
gaagaagtgcatctggtgttcgaggcgcgcagcttcctgcaccgtcaggtgcgctcgatg
gccggcagtctggccgaggtcggtctgggccgctggagcgtatctgatctggcggacgcc
ctggccgccaaggaccgcgcgcaatgcggtccggtggcgccgtcagacggtctctatctg
acgggcgtcacctatgagaccgaggcctga
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integrated database retrieval system
