Brevundimonas pondensis: IFE19_02790
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Entry
IFE19_02790 CDS
T07639
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
bpon
Brevundimonas pondensis
Brite
KEGG Orthology (KO) [BR:
bpon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpon03400
]
IFE19_02790
Enzymes [BR:
bpon01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
IFE19_02790
DNA repair and recombination proteins [BR:
bpon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
IFE19_02790
Prokaryotic type
IFE19_02790
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QTC88341
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Position
503635..505086
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AA seq
483 aa
AA seq
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MPASPPVILWFRRDLRLADNPALHHALASGRPVLPIYVRDERLEGRAIGAASRWWLDKSL
RALDADLRARGGRLILRSGDAEAQLHRLIAETGADQVFMNRLFEPEAFARDADIAHGLKA
DGVVCRGFNATLMCRPGAVLNGSGQPYKVFTPFLKALLTAAEAPSGMDAPETISVPEDAS
SEAIDDWGLHPTRPDWSSGFVGTPGEAGAKATLEAFVAGGLKTYATDRDRPDRAGTSGLA
AHLHWGEIGPWRAIEAVRAAAVQGRVPAGEAEKFVAEIGWREFSAHLLHHFPYLPERAFR
PEYDAMPWRDDAEGLAAWKAGRTGYPLVDAGMRQLWATGTMHNRVRMVVASFLIKHLLID
WRLGEAWFWDCLTDADLASNVQNWQWTAGSGADAAPYFRVFNPVVQGEKFDPQGRYVRRW
APEVAGLPDRWVHAPWTAPPMVLAEAGVRLGATYPRPIVDHVEGRERALAALKAVSAHRG
EGD
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
ttgcccgcttccccgcccgtcatcctgtggttccgtcgcgacctgcggctggccgacaac
ccagctttgcaccatgccctggcgagcgggcggccggtgctgccgatctatgtgcgggac
gagcggctggaggggcgggccatcggcgcggcctcgcgctggtggctggacaagagcctg
cgcgcgctggatgcggacctgagggcgcgcggcgggcggctgatcctgcgaagcggcgac
gcggaggcgcagctgcatcgcctgatcgccgagacgggcgccgatcaggtcttcatgaac
cggctgttcgagcccgaggccttcgcccgcgacgccgacatcgcccatggactgaaggcg
gacggggtcgtgtgccggggcttcaacgccacgctgatgtgccggccgggcgccgtgctg
aacgggtcgggccagccctacaaggtcttcacccccttcctgaaggcccttctgaccgca
gctgaagccccatcggggatggacgcgcccgagacgatctcggttccggaggatgcttcc
agcgaggcgattgacgactggggcctgcatccgacgcggcccgactggtcctctggcttt
gtcggcacgcctggggaggcgggggccaaggcgacgctggaggcctttgtcgccgggggc
ttgaagacctatgcgaccgaccgtgatcgaccggatcgggccgggaccagcggcctggcg
gcgcacctgcactggggcgagatcggtccgtggcgggcgattgaggcggtgcgcgccgcc
gccgtgcagggccgggttccggcgggagaggcggagaagttcgtcgccgagatcggctgg
cgcgagttctcggctcacctgctgcatcacttcccctatctgccggagcgggccttcagg
ccggaatacgacgccatgccgtggcgcgacgacgccgaggggctggcggcgtggaaggcg
gggcggacgggctatcccttggtggacgccgggatgcgccagctgtgggcgacggggacc
atgcacaaccgggtgcggatggtggtcgcctccttcctgatcaagcacctgctgatcgac
tggcggctgggcgaggcctggttctgggactgcctgaccgacgccgatctggccagcaat
gtgcagaactggcagtggacagcgggctcgggggccgacgctgcgccctatttccgcgtc
ttcaatccggtggttcagggcgagaagttcgatccgcaggggcgctatgtgcggcgctgg
gcgcccgaggtggcggggttgccggaccgctgggtccacgccccgtggaccgcgccgccg
atggttctggccgaggcgggggtgcggctgggcgcgacctatccccggcccatcgtggat
catgtcgaggggcgcgaacgggcgctggcggcgctgaaggcggtcagcgcccatcggggc
gagggcgactag
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