Brevundimonas pondensis: IFE19_07100
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Entry
IFE19_07100 CDS
T07639
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
bpon
Brevundimonas pondensis
Pathway
bpon03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bpon00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IFE19_07100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpon03021
]
IFE19_07100
03400 DNA repair and recombination proteins [BR:
bpon03400
]
IFE19_07100
Enzymes [BR:
bpon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IFE19_07100
Transcription machinery [BR:
bpon03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IFE19_07100
DNA repair and recombination proteins [BR:
bpon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IFE19_07100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
PQQ_syn_pqqF_N_2
Motif
Other DBs
NCBI-ProteinID:
QTC89087
LinkDB
All DBs
Position
1406305..1406664
Genome browser
AA seq
119 aa
AA seq
DB search
MARVTVEDCIEKVPNRFGLVLLAGHRARNIANGAPLTLDRDNDKNPVVALREIADDTVVP
DELRENIITTLQRVDERTEAEDEAEVVALLAEPQHMNMAEAELIRALQSDRDGGQEERY
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgtcactgtcgaagactgcatcgagaaggttccgaaccgctttggtctggtt
ctgttggccggtcaccgcgcccgcaacatcgccaacggcgcgcctctgacgctggaccgc
gacaatgacaagaacccggtcgtggctctgcgcgagatcgccgacgacactgtcgtgccg
gacgaactgcgcgagaacatcatcaccacgctgcaacgcgtcgatgaacgtaccgaggcc
gaggatgaagccgaagtcgtggccctgctggccgagccgcagcacatgaacatggccgag
gccgagctgatccgcgcgctgcagagcgatcgggacggcggtcaggaggaacgctactga
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