Brevundimonas pondensis: IFE19_07350
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Entry
IFE19_07350 CDS
T07639
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
bpon
Brevundimonas pondensis
Brite
KEGG Orthology (KO) [BR:
bpon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bpon03009
]
IFE19_07350
Enzymes [BR:
bpon01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
IFE19_07350
Ribosome biogenesis [BR:
bpon03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
IFE19_07350
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QTC89135
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Position
1451883..1453511
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AA seq
542 aa
AA seq
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MDRHPKDNDKNPRFRQDDGPRGPRKFADARPDKGGFGDRKGPSRGDRKDDRGDKPFAKGA
GKGGPKGAKEPAAPLRSERIAKAMARAGIASRREVERLIGLGKVAVNGRILDTPATLVTR
DDVITVNGKPMGAAQATRVWRYHKPAGLITSHNDPAGRPTVFDALPSGLPRVISVGRLDL
NTEGLLLLTNDGELSRALEMPDTALVRHYRARARGRITQAELDKLKTGCTIEGVHYGPME
ATIDKAKEKEDGERSSANLWISVSITEGKNREVRKVLESVGLTVNRLIRLAYGPFQLGTL
PVGAVEEVGPRVIREMLADHIRPENLPTGNSVSTPAPIPGRRTSSPIVTGKSGSAMSDPS
RKPSRVRAATEAQADAVDRRERPAKKEGWAKATPKFEHTKTFKPRARPQASEGGEWSDRP
RKPFNRSEPQFIDDRRAPRDGAKGGFSDRPKRDFKPRDGAPRSDGDRPQRDFKPREGGFS
DRPKRDFKPREGGSSDRPQRDFKPRDGAPRSGGKPGGGSRPGGGKPFGGKPSGGRGGPRD
RG
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggatcgccatcccaaagacaacgacaagaacccccgcttccgtcaagatgacggtccg
cgcggtccccgtaaattcgccgacgcgcgtccggacaagggcggcttcggagaccgcaaa
ggcccatcgcgcggcgaccgcaaggacgatcgcggcgacaagccttttgcgaagggcgcc
ggcaagggcggcccaaaaggcgccaaggaaccggccgcaccgctgcgcagcgagcgaatc
gccaaggccatggcgcgcgccggcatcgcctcgcgtcgcgaagtcgagcgtctgatcggt
ctgggcaaggtggcggtcaacggccgcatactggatacgccagcgaccctggtgacgcgc
gacgacgtgatcaccgtcaacggcaagccgatgggcgcagcccaggccacgcgcgtctgg
cgctatcacaagccggccggcctgatcaccagccacaacgatccggcgggacgcccgacc
gtgttcgacgccctgcccagcggcctgccgcgcgtgatctcggtcggacgcctcgacctg
aacaccgagggcctgttgctgctgaccaacgacggcgagctgagccgggcgctggaaatg
ccggacacggccctggtgcgtcactatcgcgcccgcgcccgcggtcgcatcacccaggcc
gagctggacaagctgaagaccggctgcaccatcgagggcgtccactacggcccgatggaa
gcgaccatcgacaaggccaaggaaaaagaggacggcgagcgcagctcggccaatctgtgg
atcagcgtctcgatcaccgaaggcaagaaccgcgaggtccgcaaggtcctggagtcggtc
ggtctgacggtgaaccgcctgatccgtctggcctatggcccgttccagctcggcactttg
ccggtcggggcggtcgaggaagtcggcccgcgcgtgatccgcgagatgctggctgaccac
atccggcccgagaacctgccgaccggcaactcggtctcgacgcccgcgccgatcccgggc
cgccgcacctcgtcgccgatcgtgacgggcaagtcgggttcggccatgtcggacccctca
cgcaagcccagccgcgtccgcgccgccacggaggcccaggccgacgcggtcgaccgccgc
gaacgcccggccaagaaggagggctgggccaaggccacgcccaagttcgagcacaccaag
accttcaaaccgcgcgctcgcccgcaagcctctgaaggcggcgagtggtcggatcgtccg
cgcaagcctttcaatcggtctgagccgcagttcatcgatgaccgccgcgcgccgcgcgac
ggcgccaagggcggcttcagcgaccgccccaagcgggacttcaagccccgtgacggcgcg
ccgcgctcggacggtgatcgtccgcaacgcgatttcaagccgcgcgagggcgggttcagc
gatcgacccaagcgggacttcaaaccccgcgagggcggttcgagcgatcgtccgcaacgt
gacttcaaaccgcgcgacggcgctccgcgctcgggcggcaagccgggcggcggctcgcgt
cccggcggcggcaaacccttcggcggcaagccttcgggcggtcgcggcggtccgcgcgac
cgcggctaa
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