Brevundimonas pondensis: IFE19_09015
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Entry
IFE19_09015 CDS
T07639
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bpon
Brevundimonas pondensis
Pathway
bpon03420
Nucleotide excision repair
bpon03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IFE19_09015
03430 Mismatch repair
IFE19_09015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpon03400
]
IFE19_09015
Enzymes [BR:
bpon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IFE19_09015
DNA repair and recombination proteins [BR:
bpon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IFE19_09015
MMR (mismatch excision repair)
Other MMR factors
IFE19_09015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
DUF3553
AAA_11
ELMO_CED12
Motif
Other DBs
NCBI-ProteinID:
QTC86316
LinkDB
All DBs
Position
1812997..1815333
Genome browser
AA seq
778 aa
AA seq
DB search
MTDLPSPRISDLARGQSPQGAADYLSGLNPEQKLAVETTEGPVLVLAGAGTGKTRVLTTR
LAHILATGRAKPWELLVVTFTNKAAREMRERIGHLIGPSAEGLRWLGTFHSVAAQILRRH
AELVGLKSSFTILDTDDQERLLKQLLEAANIDTKKHTPKSLAHMIDHWKNRGWTPEKLPP
GEDFANGKGHALYAVYQKRLATLNACDFGDLLLHNLTILSQHADLAEEYRRRFRYILVDE
YQDTNVAQYLWLRLLTSSTGNVCCVGDDDQSIYGWRGAEVDNILRFERDFPGARIVKLER
NYRSTKHILGAASALIATNQDRLGKTLWTEDDSGDKVRVRGVWDGEAEARLIADEIETAR
KQGIKYKDMAVLVRASFQMRAFEERFVMLAVPYQVIGGPRFFERAEIRDAHAYLRLIQSE
DDDLAFERIVNVPKRGIGDTSVQKILHIARENGVSAMQAVRHLLTTDELQARTRTPLANF
VRDLDRWRDLANMGTPHWQVTETLLDESGYTDMQKADRTSGQTRLDNLKELTQAMQAFET
LQGYLEHVSLVMDLDRAAPESESGAVQIMTLHGAKGLEFPLVFLPGWEEGVFPSQRSIDE
KGMKGLEEERRLAYVGVTRAKQDARISFAANRLVYGRWTSQLPSRFVDELPLAHVDPQSD
TGYYNGGGAPGMQQPKSRWDDSPSFGGGYSSPSWKRAQSFTSSAPTRPASTPARKAIIEG
QSRPVAPKSSSDWSRGDRVFHQKFGYGAVRAVEGNKLIVAFDKAGEKKVIDTFVEKTS
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacctgccttccccccgcatttccgacctcgcgcgcggccagtcgccgcaaggc
gcggccgactacctgtccggcctcaaccccgaacagaagcttgcggtcgagacgaccgag
gggccggttctggttctggccggcgccggcaccggcaagacccgcgtcctgaccacccgt
ctggcccatatccttgcgacgggtcgcgccaagccctgggaactgctggtcgtcaccttc
accaacaaggccgcgcgcgagatgcgcgagcgcatcggccatctgatcggcccctcggcc
gagggcctgcgctggctcggcaccttccactcggtcgcagcccagatcctgcgccgccat
gcggaactggtcgggctgaagtccagcttcaccatcctcgacaccgacgatcaggagcgg
ctgctgaagcagctgttggaagcggccaatatcgacaccaagaagcacacgcccaagtcg
ctcgcccacatgatcgaccactggaagaaccgcggctggacgcccgagaagctgccgccg
ggcgaggacttcgccaacggcaagggtcacgctctctacgccgtctatcagaaacggctg
gccacgttgaacgcctgcgatttcggcgatctgttgctgcacaacctcaccatcctgtcg
cagcacgctgatctggctgaggaataccgccgccgcttccgctacatcctggtggacgag
tatcaggacaccaatgtcgcccagtatctatggctgcggctgctgacctcctcgaccggc
aatgtctgctgcgtcggcgacgacgatcagtcgatctacggctggcgcggggccgaggtg
gacaacatcctgcgtttcgagcgcgacttcccgggcgccaggatcgtcaagctggagcgc
aactaccgctcgaccaagcacatcctcggcgccgcctcggccctgatcgccaccaatcag
gaccgtctgggcaagaccctgtggaccgaggacgacagcggcgacaaggtgcgcgtgcgc
ggcgtctgggacggcgaggccgaggcccgcctgatcgccgacgagatcgagaccgcccgc
aagcagggcataaagtacaaggacatggccgtcctggtccgcgcctccttccagatgcgg
gcgtttgaagaacgcttcgtcatgctggccgtcccctatcaggtcatcggcggcccccgc
ttcttcgagcgcgccgagatccgcgacgcccacgcctatctgcgcctgatccagtccgag
gacgacgacctggccttcgagcgcatcgtcaacgtgcccaagcgcggcatcggcgacacc
agcgtccagaagatcctgcatatcgcccgcgaaaacggcgtctcggccatgcaggcggtg
cgccacctgctgacgacggacgagcttcaggcccgcacccgcacgcccctggccaacttc
gtccgcgatctcgaccgttggcgcgatctggccaacatgggcacgccccactggcaggtg
acagagacccttctggacgagagcggctacacggatatgcagaaggccgaccgcaccagc
ggccagacgcgcctcgacaacctcaaggaactgacccaggccatgcaggcgttcgagacc
ctgcaaggctatctggaacacgtctccctggtcatggacctggatcgggccgcccccgag
tccgagagcggtgcggtgcagatcatgaccctgcacggcgccaaggggctggagttcccc
ctggtcttcctgcccggctgggaggaaggcgtcttccccagccagcgcagcatcgacgaa
aagggcatgaagggcctggaggaagaacgccgcctcgcctacgtcggcgtcacccgcgcc
aagcaggacgcgcgtatcagcttcgccgccaaccgtctggtctatggccgctggacctcg
caactgcccagccgcttcgttgacgaactgcctctggcccacgtcgatccgcagtcggac
accggctactacaacggcggcggcgcgcccggcatgcagcaacccaagagccgctgggac
gacagcccctcgttcggcggcggctattccagccccagctggaaacgcgcccagagcttc
acctcaagcgcccccacgcgcccggcttcaacgcccgcccgcaaggccatcatcgagggc
caaagccgtcctgtagcgcccaagtccagcagcgattggtcacgcggcgaccgcgtcttc
caccagaagttcggctatggcgccgtgcgcgccgtcgagggcaacaagctgatcgtcgcc
ttcgacaaggcgggcgagaaaaaggtcatagacaccttcgtcgagaagacctcctag
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