Brevundimonas pondensis: IFE19_09930
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Entry
IFE19_09930 CDS
T07639
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
bpon
Brevundimonas pondensis
Brite
KEGG Orthology (KO) [BR:
bpon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpon03032
]
IFE19_09930
03036 Chromosome and associated proteins [BR:
bpon03036
]
IFE19_09930
03400 DNA repair and recombination proteins [BR:
bpon03400
]
IFE19_09930
DNA replication proteins [BR:
bpon03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
IFE19_09930
Chromosome and associated proteins [BR:
bpon03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
IFE19_09930
DNA repair and recombination proteins [BR:
bpon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
IFE19_09930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
QTC86483
LinkDB
All DBs
Position
complement(1982596..1982871)
Genome browser
AA seq
91 aa
AA seq
DB search
MNKTELIGVMAEAAGISRDQAKLALEAFTDNVTSSLTNGRDVRLVGFGSFIAVDRKAGTA
RNPQTGEAIARPASRTARFRVGEGLKSALNG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaccgaactgatcggcgtcatggcggaagcggcgggcatcagccgtgaccag
gccaagctggcgctggaagccttcactgacaatgtgacgtcatcgctgacgaatggacgc
gacgtgcgcctggtcggtttcggcagcttcattgctgtcgatcgcaaggcgggaaccgcc
cgcaatccgcagaccggagaggccattgcccgccccgcctcgcgtaccgcccgcttccgg
gttggggaaggattgaaaagcgccttgaacggctga
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