Brevundimonas pondensis: IFE19_10105
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Entry
IFE19_10105 CDS
T07639
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bpon
Brevundimonas pondensis
Pathway
bpon03410
Base excision repair
bpon03430
Mismatch repair
bpon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IFE19_10105 (recJ)
03430 Mismatch repair
IFE19_10105 (recJ)
03440 Homologous recombination
IFE19_10105 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpon03400
]
IFE19_10105 (recJ)
DNA repair and recombination proteins [BR:
bpon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
IFE19_10105 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
IFE19_10105 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
IFE19_10105 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QTC86511
LinkDB
All DBs
Position
complement(2013368..2015170)
Genome browser
AA seq
600 aa
AA seq
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MADGGNSPAFLDVSRSLSGRAWRQRPAEAGTIRAHMQALNLDEPMARALAARAVAADQGE
NFLRPTLRALFPDPSSFMDMDTAATAIIDALQAGSSIHVFADYDVDGASSAALLVRWFRT
LGAELPIYVPDRLTEGYGPSARAFDTLKARGADLVITVDCGAAANEAVAHAAAIGLKVVV
IDHHMMREEPPACLAVVNPNRPGCNSGQGNLAAAGVVFVLLAALNREARARGLFEGKAEP
DIRQWLDLAAMGAICDVTGLTGFNRALTSLGLKVMSDWKNPGLKALLAAAGAEPGPAKSN
HAGFILGPRINAGGRIGKSDLGARLLSTDDPDEARMLAQELDGLNIARREVEAQVTEQAV
RRVEATGAHADESALVVVSGEDWHPGVVGIVAGRLRERWRKPVIVIGVDAVNGVGKGSGR
SQPGMNLGRAVQAAWNEGVLIAGGGHAMAAGLTVAADRIDELRAFLNERLSGERAEAVAQ
DWVEVDALIDPRAATRDLFEAFEQLAPYGPANPEPLFALQGVQAREPVAMNGGHVRCRLV
GPDGASVRAIAWRCADLPGGKALLEGQGGLNLVGRLKADDWNGRRGVQFEIEDVADPRMA
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggctgacggtggaaacagtcccgccttcctcgacgtctcgcgctcgctgtcgggccgc
gcctggcggcagcgcccggccgaggccgggacgatccgcgcccatatgcaggccctgaat
ctggacgagccgatggctcgcgccctggcggcgcgcgctgtggcggcggatcagggcgaa
aacttcctgaggccgacgctgcgggccctgttccccgatccctccagcttcatggacatg
gacacggcggcgaccgccatcatcgacgccctgcaggcgggcagcagcatccacgtcttc
gccgactatgatgtggacggcgcctccagcgcggccctgctggtgcgctggttcaggacc
ttgggcgcggagctgcccatctatgtgccggatcgtctgactgagggttacggccccagc
gcgcgggcctttgacacgctgaaggcgcgcggcgccgatctggtcatcactgtcgattgc
ggggcggcggccaatgaggcggtggcccacgccgccgcgatcggcctgaaggtcgtggtc
atcgatcatcacatgatgcgcgaggagccgccggcctgtctggccgtggtcaatccgaac
cggcccggctgtaactcggggcagggcaatttggcggcggcgggggtggtcttcgtcttg
ctggcggcgctgaaccgcgaggcgcgggcgaggggcctgttcgagggcaaggcagagccg
gacatccgccagtggctggatctggccgccatgggcgcgatctgcgacgtgaccggcctg
accggcttcaaccgggccctgaccagcctgggcctgaaggtcatgtcggactggaaaaat
ccggggctgaaggccctgctggccgccgccggggcggagccaggaccggccaagtccaac
cacgcgggcttcatcctggggccgcgcatcaatgccggggggcggatcggcaagtcggat
ctgggggcgcgcctgctgtccaccgacgatcccgacgaggccaggatgctggcgcaggaa
ctggatgggctgaacatcgcccggcgcgaggtcgaggcccaggtgacggagcaggccgtg
cgccgcgtcgaggcgacgggcgcgcacgcggacgagtcggccctggtcgtggtctcgggc
gaggactggcaccccggcgtggtcggcatcgtggcgggacggctgcgcgaacgctggagg
aagccggtcatcgtcatcggcgtcgacgccgtcaacggcgtgggcaaggggtcgggccgg
tcgcagccgggcatgaatctggggcgcgccgtgcaggcggcctggaacgagggcgtgctg
atcgccgggggcgggcacgctatggcggctggcctgacggtggcggccgaccgcatcgac
gagttgcgggccttcctcaatgagcgcctgtcgggcgagcgggccgaggccgtggcccag
gactgggtcgaggtggacgccctgatcgatccgcgcgcggcgacgcgcgacctgttcgag
gcctttgagcagttggcgccctatggcccggccaaccccgagcccctgttcgccctgcaa
ggggtgcaggcgcgcgagccggtcgccatgaacggcggtcatgtgcggtgccgtctggtt
gggccggacggggcgtcggtgcgggccatcgcctggcgctgcgctgacctgcccggcggc
aaggcgctgctggaggggcagggcgggttgaacctggtcgggcggctgaaagccgatgac
tggaacggtcgtcgcggggtgcagttcgagatcgaggacgtggctgacccgcgcatggcc
tga
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