Brevundimonas pondensis: IFE19_12295
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Entry
IFE19_12295 CDS
T07639
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
bpon
Brevundimonas pondensis
Brite
KEGG Orthology (KO) [BR:
bpon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpon03021
]
IFE19_12295 (rpoH)
Transcription machinery [BR:
bpon03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IFE19_12295 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
Sigma70_r3
HTH_3
HTH_11
KORA
HTH_19
GntR
NirdL-like_HTH
Sigma70_r4_2
DUF3431
HTH_15
PgaD
Motif
Other DBs
NCBI-ProteinID:
QTC86908
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Position
2459858..2460742
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AA seq
294 aa
AA seq
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MANSTLAVMSPEQGLSRYLTEIRKFPMLTKDEEFMLAKRWSEHQDPEAAHRLVTSHLRLV
AKIAMGYRGYGLPIGEVISEGNVGLMQAVKKFDPDKGFRLATYAMWWIRASIQEYILRSW
SLVKMGTTAAQKKLFFNLRKAKSQISAFEEGDLHPEHLAAIATKLGVTEEEVTNMNRRLG
GDASLNAPLRADGESEWQDWLADDDAVSQETALADSEEKSIRMSLLEEAMQELTDREKHI
LTERRLKDDPVTLEELASQYGVSRERVRQIEVRAFEKLQKAMRAAAEERNLVDA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggctaactcgacactcgcggtgatgtcgcctgaacagggactgtcgcgctatctcacg
gaaatccgcaagtttccgatgctcaccaaggacgaggagttcatgctcgccaagcgttgg
agcgagcaccaggaccccgaagcggcccaccgcctcgtcacctctcaccttcgtctcgtg
gccaagatcgccatggggtatcgcggctacggcctgccgatcggcgaagtgatctcagag
ggcaacgtcggcctgatgcaggccgtcaagaaattcgatcccgacaagggcttccgcctg
gccacctacgccatgtggtggattcgcgcgtccattcaggaatacatcctgcgttcctgg
tcgctcgtgaagatgggcaccaccgccgcccagaagaagctcttcttcaacctgcgcaag
gccaagagccagatctcggccttcgaggaaggcgacctgcaccccgagcacctcgccgcc
atcgccaccaagctaggggtgacggaagaagaagtcaccaacatgaaccgccgcctcggc
ggcgacgcctcgctgaacgcgccccttcgcgccgacggcgaaagcgagtggcaggactgg
ttggccgacgacgatgcagtgtcccaggaaacggccctggccgactccgaggaaaagtcc
atccgcatgagcctgcttgaagaagccatgcaggaactgaccgaccgcgagaagcacatc
ctcacggaacgccgcctcaaggacgatccggtcacgctggaagaactggccagccaatac
ggcgtcagccgtgaacgcgtgcgtcagatcgaggtccgcgccttcgagaagctgcagaag
gccatgcgcgccgccgccgaagaacggaacctggtcgacgcctga
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