Brevundimonas pondensis: IFE19_14345
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Entry
IFE19_14345 CDS
T07639
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
bpon
Brevundimonas pondensis
Brite
KEGG Orthology (KO) [BR:
bpon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpon03016
]
IFE19_14345
Enzymes [BR:
bpon01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
IFE19_14345
Transfer RNA biogenesis [BR:
bpon03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
IFE19_14345
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QTC87260
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All DBs
Position
2853739..2854353
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AA seq
204 aa
AA seq
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MTVYLHEGDLPDGLDLGPEVAIDSETMGLRFRRDPLCVVQLSSGNGDAHVVRLNRPGYDC
PNLKALLADPKVLKIFHFGRFDIGMFDLHLGVETRPVYCTKIASKLARTYTDRHGLKDVA
RELAGVDMSKAQQSSDWGSPALSQAQLDYAASDVLYLHAIKAKLDVMLEREGRAELARAC
FDFLPTRSRLDLAGWDEIDIFAHA
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtttacctgcacgaaggcgacctgcccgacggcctcgacctcggccccgaggtc
gcgatcgattccgagaccatgggcctgcgcttccgtcgcgatcccctgtgcgtggtgcaa
ctgtcgtcgggcaatggcgacgcccatgtcgtgcggctgaaccgccccggctatgactgc
cccaacctgaaggccctgctggccgatcccaaggtgctgaagatcttccacttcggacgc
ttcgacatcggcatgttcgatctgcacctcggcgtcgagacccgcccggtctattgcacc
aagatcgcctcgaagctggcccgcacctacaccgaccgtcacggcctgaaggacgtggcg
cgcgaactggccggcgtggacatgtccaaggcacagcagagctcggactggggctcgccg
gccctgtcgcaggcccagttggactacgccgcctcggacgtcctctatctgcacgccatc
aaggcgaaactggacgtcatgctggagcgcgaaggtcgcgccgaactggcccgcgcctgc
ttcgacttcctgcccacccgttcgcgtctcgacctggccggttgggacgagatcgacatc
ttcgcccacgcctga
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