Brevundimonas pondensis: IFE19_16105
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Entry
IFE19_16105 CDS
T07639
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bpon
Brevundimonas pondensis
Pathway
bpon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IFE19_16105 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpon03019
]
IFE19_16105 (pnp)
03016 Transfer RNA biogenesis [BR:
bpon03016
]
IFE19_16105 (pnp)
Enzymes [BR:
bpon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
IFE19_16105 (pnp)
Messenger RNA biogenesis [BR:
bpon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
IFE19_16105 (pnp)
Transfer RNA biogenesis [BR:
bpon03016
]
Prokaryotic type
tRNA degradation factors
IFE19_16105 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
QTC87580
UniProt:
A0ABX7SL10
LinkDB
All DBs
Position
complement(3262792..3265026)
Genome browser
AA seq
744 aa
AA seq
DB search
MFDIKRKTIEWAGRPLTLETGRIARQADGAVLATYGETVVLATVVYGRQPKPGLDFFPLT
VNYQEKTFAAGKIPGGYFKREGRPSEKETLVSRLIDRPIRPLFVKGFKNETQVVITVLQH
DMENDPDVLGMVAASAALTISGVPFMGPIGAARVGLIDGELVLNPAIDAMADSALDLVVA
GTQDALMMVESEAKELSEEKMLEALMFAHAGMQPVIDAIIDLAEHAAKEPFDFQAEDHSD
VVASIKKLVGEDIKAAYAHPGKYERRSGVDAAKKTAAAALVKTDENPEGVDSSKFSAAFK
ECEADVLRRDIIENAHRVDGRALDKVRAIVSEVGVLPRTHGSSLFTRGETQALVVATLGT
GEDEQYIDSLSGTYKESFLLHYNFPPYSVGEAGRMGSPGRREIGHGKLAWRAIRPMLPAK
EDFPYTIRLVSEITESNGSSSMATVCGSSLALMDAGVPLVRPVSGIAMGLILEPSGEFAI
LSDILGDEDHLGDMDFKVAGTSEGITSLQMDIKVAGITKEIMEQALTQASAGRLHILDEM
SKAMDAPRAELGEHAPKIETIKIPVDKIREVIGSGGKVIREIVEKTGAKIDIGDDGTIKV
AANDQEKIDAAKNWINSIAAEPEMGAIYTGKVVKVVDFGAFVNFFGAKDGLVHVSQIALE
RVANPADVLSEGQEVKVKFLGFDDRGKTKLSMKVVDQATGEDITDKINAERAERGEAPLS
EDTGGRPKREGGDRGGDRGRRRRD
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatatcaaacgcaagacgatcgagtgggccggccgcccgctgacgctggaaacc
ggccgcatcgcccgtcaggctgacggcgccgtgctggcgacctacggcgagaccgtggtc
ctggccaccgtcgtctatggccgccagcccaagccgggcctggatttcttcccgctgacc
gtcaactaccaggaaaagaccttcgcggccggcaagatcccgggcggctacttcaagcgt
gaaggccgtccgtcggaaaaagagaccctggtctcgcgcctgatcgaccgtccgatccgc
cccctgttcgtcaagggcttcaagaacgagacccaggtcgtcatcaccgtgctgcagcac
gacatggagaacgacccggacgtcctgggcatggtcgccgcctcggccgccctgaccatc
tcgggcgtgcccttcatgggccccatcggcgccgcgcgcgtcggcctgatcgacggcgag
ctggtcctgaaccccgccatcgacgccatggctgactcggcgctcgacctggtcgtcgcc
ggcacgcaagacgccctgatgatggtcgaatccgaagccaaggagctgtcggaagagaag
atgctcgaggccctgatgttcgcgcacgcgggcatgcagccggtcatcgacgccatcatc
gacctggccgagcacgccgccaaggagcccttcgacttccaggccgaggaccactccgac
gtcgtcgcctcgatcaagaagctggtcggcgaagacatcaaggccgcctacgcccacccg
ggcaagtatgagcgccgttcgggcgtcgacgcggccaagaagaccgccgccgccgccctg
gtgaagaccgacgagaaccccgagggcgtcgacagctccaagttctcggccgccttcaag
gaatgcgaagccgacgtcctgcgtcgcgacatcatcgagaacgcccaccgcgtcgacggc
cgcgccctcgacaaggtccgcgccatcgtttcggaagtcggcgtcctgccgcgcacccac
ggttcgtcgctgttcacgcgcggcgaaacccaggccctggtcgtcgccaccctcggcacc
ggcgaggacgagcagtacatcgacagcctgtcgggcacctacaaggagtccttcctgctg
cactacaacttccccccctattcggtgggtgaagctggccgcatgggttcgcccggccgt
cgcgaaatcggtcacggcaagctggcctggcgcgccatccgtccgatgctgccggccaag
gaagacttcccctacaccatccgtctggtgtcggagatcaccgagtccaacggttcgtcc
tcgatggccacggtctgcggttcgtcgctggccctgatggacgccggcgtgccgttggtc
cgtccggtctcgggcatcgccatgggtctgatcctggagccgtcgggcgagttcgccatc
ctgtcggacatcctgggtgacgaagatcacctgggcgacatggacttcaaggtcgcgggc
acctcggaaggcatcaccagccttcagatggacatcaaggtcgctggcatcaccaaggag
atcatggagcaggccctgacccaggcttcggccggtcgtctgcacatcctcgacgaaatg
tcgaaggccatggacgctccgcgcgccgagctgggcgagcacgcgcccaagatcgaaacc
atcaagatcccggtcgacaagatccgtgaagtgatcggttcgggcggcaaggtgatccgc
gagatcgtcgagaagaccggcgccaagatcgacatcggcgatgacggcaccatcaaggtc
gccgccaacgaccaggagaagatcgacgccgccaagaactggatcaactccatcgccgcc
gagccggaaatgggcgcgatctacaccggcaaggtggtcaaggtcgtcgacttcggcgcc
ttcgtgaacttcttcggcgccaaggacggcctggtccacgtgtcccagatcgctctggaa
cgcgtcgccaacccggccgacgtcctgtcggaaggccaagaggtcaaggtcaagttcctg
ggcttcgacgaccgcggcaagaccaagctgtcgatgaaggtcgtggatcaagccacgggc
gaagacatcaccgacaagatcaacgccgagcgcgctgaacgcggtgaagccccgctgtcg
gaagacaccggcggccgtccgaagcgtgaaggcggcgatcgcggtggcgatcgtggccgt
cgccgtcgcgactaa
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