Brevundimonas pondensis: IFE19_16115
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Entry
IFE19_16115 CDS
T07639
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bpon
Brevundimonas pondensis
Brite
KEGG Orthology (KO) [BR:
bpon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpon03016
]
IFE19_16115 (truB)
Enzymes [BR:
bpon01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
IFE19_16115 (truB)
Transfer RNA biogenesis [BR:
bpon03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IFE19_16115 (truB)
Prokaryotic type
IFE19_16115 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QTC87582
UniProt:
A0ABX7SIP7
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All DBs
Position
complement(3265644..3266576)
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AA seq
310 aa
AA seq
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MARRKKGEIVNGWVCLDKPYEMGSTEAVTKVRRLFDAQKAGHAGTLDPLASGILPIALGE
ATKTVPFMMDAEKVYRFTIHWGISTDSIDREGEIIARSDVRPTVEAVKAALPAFVGEIDQ
APPQFSAIRVNGERAYDLARDGVQFELETRKVVIHEAAVTDAPDADHVEITMRTGKGVYV
RSLARDLAAMLGAEGHVSALRRERVGPFSTENAVTLDFLVDLAHKGAALEGLLPVSTALD
DIPDLAVTEQDAFSLRQGRPIVLLPRQVETLKSQLSAGSRTVSAFVGETLVALCTMRAGR
LEPDRVFNLP
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtcgcaagaagggggagatcgtcaacggctgggtctgcctggacaagccctat
gagatggggtcgaccgaggcggtgacgaaggtccgccgcctgttcgacgcccagaaggcc
ggtcacgcggggacgctggacccgctggcctcgggcatcctgcccatcgccctgggggaa
gcgaccaagaccgtgcccttcatgatggacgcggagaaggtctatcgcttcaccatccac
tggggcatctcgaccgacagcatcgaccgtgagggcgagatcatcgcccgttcggacgtg
cggcccacggtcgaggcggtgaaggcggccctgccggcctttgtcggtgagatcgatcag
gcgccgccacagttttccgccatccgcgtcaacggcgagcgggcctatgatctggcgcgc
gacggggtgcagttcgagctggagacccgcaaggtcgtgatccatgaggcggccgtcacc
gacgccccggacgccgaccacgtggaaatcaccatgcgcacgggcaagggcgtctatgtc
cgttccctggcccgcgacctggccgccatgctgggcgccgaggggcacgtttcggccctg
cggcgcgagcgggtggggccgttctcgaccgagaacgccgtcactctggattttctcgtc
gatctggcgcataagggcgccgccttggaaggcctgctgcccgtttcgaccgctctggac
gacatcccggatctggccgtcacggaacaggacgccttctcgctgaggcagggacggccg
atcgttctgctcccccgtcaggttgagaccttgaagagccagctatccgccggttcgcgc
acggtgtcggccttcgtgggagaaacgctcgtcgcgctctgcaccatgcgggccggacgg
ctagaacccgaccgtgttttcaatctcccctag
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