Bergeyella porcorum: BPO_0037
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Entry
BPO_0037 CDS
T09705
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bpor
Bergeyella porcorum
Pathway
bpor03420
Nucleotide excision repair
bpor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BPO_0037
03430 Mismatch repair
BPO_0037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpor03400
]
BPO_0037
Enzymes [BR:
bpor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BPO_0037
DNA repair and recombination proteins [BR:
bpor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BPO_0037
MMR (mismatch excision repair)
Other MMR factors
BPO_0037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
WOC50684
UniProt:
A0AAU0EYK2
LinkDB
All DBs
Position
37944..40301
Genome browser
AA seq
785 aa
AA seq
DB search
MWVQKNNWKMDYLKGLNDAQYQAVTTLEGPLMVLAGAGSGKTRVLTMRIAHLITNGVSPF
NILALTFTNKAAREMKERIAKVVGDSDAKSIWMGTFHSVFARILRSEGHYLGFPSNFTIY
DTQDAQNVLKKVIKDLNIDTDVYKPKKVISRISAYKNNLITVRAYNNNPELIEADQKANM
GHMGTIYAKYVEACFKNGAMDFDDLLLRTNELLTRFPEVLAKYQDRFRYILVDEYQDTNH
SQYLIVKALASKFENICVVGDDAQSIYSFRGANIYNILNFKKDYPDAVTVSLEQNYRSTQ
NIVDAANDVIAKNEQQFKKNVFSDNEVGEKIKIYRALSDADEAGFVARNIWELHNAQQRH
FSEFAILYRTNAQTRAFEDALRKKNIPYRVYGGLSFYQRKEVKDLVAYLRLLVNSNDNEA
LLRIINYPTRGIGETTQNKLIVFADAQGISIAQVLDNLGIYAAQLGFNNGVLNKLADFWS
MIKAFEVMLKTEDAYTVSMEVAKRSGLIKSLKEDQTPEGISRLENVQELLNSMRGFIDEQ
NQLEDGDASLTNFLGNIALSTDQDNNQEDDGNKVALMTIHLSKGLEFPVVHLVGLEENLF
PSFMSSSTREELEEERRLFYVALTRAEKQAFFSYAVTRFQWGKITDAEPSRFLSEMNTEY
IEFINPVAERQFINRSGLKSSIFDDAPSEPRTFKKIEPKKKIERSEPLTPVSKNLKPIAK
AKINTPSGTAAEDIEVGDQVRHDRFGIGTVIFLDGTDPQNIKAKVYFQNEGEKNLILKFA
KLTKI
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
ttgtgggttcaaaaaaataattggaaaatggattatctgaaaggtctcaatgatgctcaa
tatcaagctgtaaccactttagaaggcccactgatggtgctggcaggagctggttcgggg
aaaacccgtgtgctgacgatgagaatcgctcacctgataactaatggcgttagtccgttc
aatattttagcccttacctttaccaataaagccgcccgagagatgaaagagcgtattgcc
aaagtggtaggggatagcgatgctaaaagtatctggatgggtacctttcactctgtgttt
gcaagaatcctcagaagcgaagggcattacctaggttttccttccaattttaccatttat
gatacgcaagatgctcagaatgtcttgaagaaagtgattaaagaccttaatatagacacc
gatgtttataaacctaaaaaggtaatatctagaatttcggcgtataaaaataatctgatt
accgtacgggcatacaataataatccagaactgatagaagcagaccaaaaggccaatatg
ggacatatgggaaccatctatgctaaatatgtggaagcttgttttaaaaatggggcaatg
gattttgatgatttgctactgcgtaccaatgaacttctaacgagatttccagaggtttta
gctaaatatcaagaccgtttcagatacattttggtagatgagtatcaggataccaatcac
tctcagtatctcattgtaaaagctttggcttcaaaatttgaaaatatctgcgtggtggga
gatgatgcgcagtctatctactctttccgtggggctaatatctataacatcctcaatttt
aaaaaggattatcccgatgccgtaacggtctctttggagcaaaattaccgttctacacag
aatattgtagatgctgccaatgatgtcattgctaaaaatgaacagcagtttaagaaaaat
gttttcagtgataatgaagtgggagaaaaaataaagatttaccgtgccctttcagatgct
gatgaggcgggctttgtagcaagaaacatttgggaactgcacaatgcccagcaacgccat
tttagtgaatttgccattctttacagaaccaacgcacagactcgggcatttgaagatgct
ttgagaaagaaaaatattccttatcgggtttatggtggcttatctttctatcaaagaaag
gaagtgaaagatttagtggcttaccttcgcctattggtaaactctaatgacaacgaggct
ttgctgagaatcatcaattatcctacaagaggtattggggaaaccacacagaataaactc
attgtatttgcggatgcacagggtatttccattgctcaagtgttggacaacttagggatt
tacgccgctcagctaggctttaacaatggtgttttgaataagttggcagatttttggtca
atgataaaagcctttgaagtgatgctaaaaactgaagatgcctatacagtatctatggag
gtagccaaacgcagtggactgataaaatccctgaaagaagaccaaacaccagagggaatc
tctcgattggagaatgtgcaggaattactcaactctatgcgagggtttatagatgaacaa
aaccaattggaagatggtgatgctagccttaccaatttcctcggaaatattgccctttct
accgaccaagataataaccaagaggatgatggtaataaagtagcactaatgaccatccac
ctctccaaagggctagaatttcctgtggttcacctagtaggattagaggaaaacctcttc
ccaagctttatgagttcctctacacgagaggagctagaagaagagcgaagattgttttat
gtggcacttaccagagcagagaaacaagcctttttctcctatgctgttacgaggtttcaa
tgggggaaaatcacagatgcagagccatcgcgtttccttagcgagatgaatacggagtat
atagagtttatcaatcccgtagcagaacggcagtttattaatcgttctgggctgaaatcc
agcatttttgatgacgctccaagtgaaccgagaacattcaagaaaatagaacctaaaaag
aaaatagaacgcagtgagccattaacgccagtgtccaaaaatctaaaacccattgctaag
gcaaaaatcaatacgccaagcggaacggcagcggaagatatagaggtaggagatcaggta
aggcacgatagattcgggataggcactgtaatctttctagatggtaccgacccgcaaaac
atcaaagctaaagtttattttcaaaacgaaggtgagaaaaaccttatcctcaaatttgca
aaactgacaaaaatctaa
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