Bergeyella porcorum: BPO_0141
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Entry
BPO_0141 CDS
T09705
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bpor
Bergeyella porcorum
Pathway
bpor03030
DNA replication
bpor03430
Mismatch repair
bpor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BPO_0141 (holA)
03430 Mismatch repair
BPO_0141 (holA)
03440 Homologous recombination
BPO_0141 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpor03032
]
BPO_0141 (holA)
03400 DNA repair and recombination proteins [BR:
bpor03400
]
BPO_0141 (holA)
Enzymes [BR:
bpor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BPO_0141 (holA)
DNA replication proteins [BR:
bpor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BPO_0141 (holA)
DNA repair and recombination proteins [BR:
bpor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BPO_0141 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
IBP39
TOPRIM_C
Motif
Other DBs
NCBI-ProteinID:
WOC50788
UniProt:
A0AAU0F074
LinkDB
All DBs
Position
complement(163450..164487)
Genome browser
AA seq
345 aa
AA seq
DB search
MKELDSILKSIKNKTFSPIYFFHGEEPYYIDVAVKSFENDVLTEDEKAFGQTVVYGKDTN
VAEIIALARQFPMFGNYNLIIVKEAQDLKFNEEESKILESYIDNPVETTILVLAHKHKKI
DARKKFVKALQKKGQLFYSEPIKDYNLASWIATQFTAFGIKTAPNISYLLAEYLGNDLSR
ISNELSKLKLILKDGEILDEKLVETHIGISKDFNVFELQKALGLKNTEKAIKIAYYIGKN
PKSNSFPMIAGNLYNYFSNIIIYHTMQGQSQQAIATAMGVNPYFVKEYADVARFYPLKHA
TRIISLIREADLKNKGLGANKMEESELLIELTYKILNVDKIKVKL
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaattagattcaatcctcaaaagtattaaaaataaaacattctcacccatttat
tttttccacggtgaagagccctactatatagatgttgccgtaaaatcttttgaaaacgat
gtacttacagaagatgaaaaggcctttgggcagacggtagtatacggcaaagataccaat
gtagcagagattatcgccttggctaggcagtttcctatgtttggaaattataatctgatt
attgtaaaagaagcccaagatttaaaattcaatgaggaagaaagtaaaattttagaatct
tatattgataatcctgtggagactaccatcttggtactagctcataagcataagaaaatt
gatgccagaaagaagtttgtaaaagcccttcaaaaaaaaggacaactattttacagcgaa
cctatcaaggattataatttagccagttggattgccacacagtttaccgctttcggtatc
aaaacggctcccaacatctcttatcttttggcagaatatttaggaaatgatttatccaga
atttccaatgaactatccaagctaaaacttatcctaaaagacggtgaaattttagatgaa
aaattggtagaaacgcacattggcatcagtaaagatttcaatgtatttgaacttcaaaag
gctttgggactcaaaaacacagagaaagcaattaaaattgcttattatattggtaaaaat
cctaaaagcaattcgttcccaatgattgcaggaaacctctacaattatttttctaacatc
atcatctaccatacaatgcaagggcaaagccagcaagccattgcaacagctatgggggta
aatccctattttgtgaaagagtatgcagatgtagcacggttttatcctctaaaacacgcc
accagaatcatttccctaatccgtgaagccgaccttaaaaacaaaggtttaggagccaat
aagatggaggaaagcgaactgctcatagagctcacctacaagatattgaatgtggataaa
atcaaagtgaagctttag
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