Bergeyella porcorum: BPO_0166
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Entry
BPO_0166 CDS
T09705
Symbol
gyrA
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
bpor
Bergeyella porcorum
Brite
KEGG Orthology (KO) [BR:
bpor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpor03032
]
BPO_0166 (gyrA)
03400 DNA repair and recombination proteins [BR:
bpor03400
]
BPO_0166 (gyrA)
Enzymes [BR:
bpor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BPO_0166 (gyrA)
DNA replication proteins [BR:
bpor03032
]
Prokaryotic type
DNA Topoisomerases
BPO_0166 (gyrA)
DNA repair and recombination proteins [BR:
bpor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BPO_0166 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF6688_C
Motif
Other DBs
NCBI-ProteinID:
WOC50813
UniProt:
A0AAU0EZ25
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All DBs
Position
196236..198800
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AA seq
854 aa
AA seq
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MNTEGERLIPINIVDEMKTSYIDYSMSVIVSRALPDVRDGLKPVHRRVLYGMYGLGVFHN
RKYLKSARIVGDVLGKYHPHGDISVYDAMVRMAQPWSLRYPQVDGQGNFGSMDGDPPAAM
RYTEARLKKISDEVLSDLDKETVDFQNNFDDSLTEPTVLPTKIPNLLVNGTSGIAVGMAT
NMAPHNLSEAVDGICAYIDNKDITVDELMKHIIAPDFSTGGIIYGYDGVRDAFHTGRGRI
VLRAKVNFEEVGNRNAIIVTEIPYQVNKAEMIARAAELVKEDKIPGIHEIRDESDRRGMR
IVYELKNDAIPNVVLNLLYKYTALQTSFSVNNIALVNGRPEQLNLKDIIRHFVDHRHEVV
IRRTEYELKKAKERAHILEGFMKVIASQDTLDRAIYIIRHSATPQEAKEGLMAEFELSEI
QAQAILDLRLARLTGMELDKIRAEYEEIMALIKDLEDILSNEGRRFEIIKNEMLEIKEKY
GDERRTEIDYAGGDMSIEDFIPNETVVVTISHAGYIKRTSLSEYRVQSRGGVGNKAATTR
DEDFLEYIVSATNHQYMLFFTEKGKCYWLRVFEIPEGSRTAKGRAIQNLINIESDDKVKA
YIRTNDLKDAEYVKQMYVVMITKNGTVKKTSLEAYSRPRTNGINAIEIRDNDQLLGAKLT
DGQSEIMIATKSGKCIRFPEEKARAVGRGSIGVRGISMEDDDEVIGMIVVNDVANESVLV
VSEKGYGKRSAVEDYRITNRGGKGVITLNVTEKTGNLIAIQNVVDGDGLMIINKSGVAIR
MSVDELRVMGRNTQGVKLINLKNNDEIAAIAKVEMDKEVEEETEDIADAEIINDASNDPT
IENASENQEAEDKE
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgaatacagaaggagaaagattaatacccatcaacattgttgatgaaatgaagacctct
tacattgattattcgatgtcggttattgtatctcgtgcattgcccgatgtaagagatgga
ctaaaacctgtacacagaagggtattgtacggaatgtatggcttgggcgtttttcataat
agaaaatatttgaaatctgccagaattgtaggagatgtattgggtaaatatcacccacac
ggcgatatttctgtgtatgatgctatggtgcgtatggctcagccttggagtttgcgttat
ccacaggtagatgggcaaggtaacttcggttctatggatggcgacccaccagcggcaatg
cgttacaccgaggcaaggctcaagaaaatttcagatgaagttttatcagatttagataaa
gaaaccgttgattttcaaaacaactttgacgattcccttaccgagcctaccgttttacca
accaaaattccaaatcttttggtaaacggaacttcggggattgctgtgggtatggcgacc
aatatggctccgcacaatttgtctgaagctgtagatggtatctgtgcttatattgacaat
aaagatattacggtagatgagctgatgaagcatatcatcgctccagatttctctacaggc
ggtatcatctatggttatgatggtgtacgagatgccttccatacaggaagaggtagaatt
gtgcttcgtgcaaaggtaaactttgaggaagtgggcaacagaaatgccatcatcgttaca
gagattccatatcaggtaaacaaagccgagatgattgcccgtgccgcagaattggtaaaa
gaagataaaataccaggcatccacgaaatccgagacgaatctgataggagagggatgcgt
atcgtttatgaattgaaaaacgacgctattccaaatgtggtactcaatctactttataaa
tatacggcacttcagacatctttcagtgtgaacaatatcgctttggtaaacggaagacca
gagcaactcaatctgaaagacatcatccgccactttgtagaccaccgtcacgaagttgtg
ataagaagaaccgagtacgaactgaaaaaagccaaagaaagagcccatattttagaaggt
tttatgaaggtgattgcttcgcaagataccttggatagagctatctacatcatccgccat
agtgctacgccacaagaagcaaaagaaggcttaatggcagagtttgaactttcggaaatc
caagcacaggccatcttagatttgagattggcaaggcttaccggaatggaattggacaaa
atccgtgcagagtatgaagaaattatggctctcatcaaggatttggaagacatcctttcc
aacgaaggcagaaggtttgaaatcattaaaaacgaaatgctcgaaatcaaagaaaaatat
ggtgacgagcgtagaacagaaatagactatgcaggtggtgatatgtctatagaagacttt
atcccgaatgaaacggtggtagtaaccatctctcacgcaggttatattaagagaacttcc
ctttctgagtaccgtgtacagagtagaggaggagtagggaataaagcggcaactaccaga
gatgaagatttcttagaatacatcgtttctgctaccaaccaccaatatatgctcttcttt
acagagaaaggaaaatgttattggctaagggtgtttgaaattccagaaggttctagaaca
gcgaaggggagagctatccaaaacttgattaatatagaatctgacgataaagtaaaagcc
tatatcagaaccaatgatctgaaagatgccgagtatgtgaaacaaatgtatgtggtgatg
attaccaaaaatggtacggtgaagaaaacttcccttgaggcttattctagaccgagaacc
aatggtatcaatgcgatagaaattcgtgataacgaccaattgctcggagcaaaacttacc
gatggacaatccgaaataatgattgctaccaaatctggtaagtgtatccgattcccagaa
gaaaaggcaagagctgtgggtagaggctccattggagtgcgagggatctctatggaagat
gatgacgaggtaattggtatgattgttgtgaatgatgtagccaatgaaagcgttttagta
gtttcagaaaaaggctatggcaaacgctcggcggtagaagattatcgtatcaccaaccgt
ggtggaaaaggcgttatcaccctaaatgttactgaaaaaacaggaaatcttatcgctatt
caaaatgtggtagacggtgatggattgatgattatcaacaaatctggggttgccatcaga
atgagtgtagatgaactccgcgtgatgggaagaaatacccaaggtgtgaagcttatcaac
ttgaaaaataatgatgagatagctgccattgccaaagtggaaatggataaggaagtagag
gaggagacagaggatattgctgatgcagaaatcattaacgatgcctctaatgacccaacc
atagaaaacgcttctgaaaatcaagaggcagaagataaagaataa
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