Bergeyella porcorum: BPO_0226
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Entry
BPO_0226 CDS
T09705
Symbol
gyrB
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
bpor
Bergeyella porcorum
Brite
KEGG Orthology (KO) [BR:
bpor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpor03032
]
BPO_0226 (gyrB)
03400 DNA repair and recombination proteins [BR:
bpor03400
]
BPO_0226 (gyrB)
Enzymes [BR:
bpor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BPO_0226 (gyrB)
DNA replication proteins [BR:
bpor03032
]
Prokaryotic type
DNA Topoisomerases
BPO_0226 (gyrB)
DNA repair and recombination proteins [BR:
bpor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BPO_0226 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WOC50873
UniProt:
A0AAU0EZ66
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All DBs
Position
251528..253465
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AA seq
645 aa
AA seq
DB search
MSNNQYTASSIQALEGIEHVRMRPSMYIGDVGETGLHHLVSEVVDNSIDEALAGHCDTIK
VTIHEGNSISVVDNGRGIPVDFHEKEQKSALEVVMTKIGAGGKFDKDSYKVSGGLHGVGV
SCVNALSTDMITRVYRDGKIYQQKYQRGKAVTEVEVVGETDKRGTEQFFQPDDTIFNELV
YKYDKLSTRLRELAFLNKGITITLTDERETQEDGSFKTETFYSKEGLNEFVKYIDNAKEP
LMETPIHIESKEGDEIPVEVALRYNTSYHSNIYSYVNNINTRDGGTHLSGFRRALTNTFK
KYSEEVLTGKDKEIKIEGEDFLEGLTAIVSVKVMEPQFEGQTKTKLGNSEVSGAVSRVVS
EALKNFLEENPSEAKLIVQKVVTAAKARLAAQKARENIQRKTPLGGAGLPGKLADCSSKD
PAISEIFLVEGDSAGGTAKQGRDRHFQAILPLRGKILNVEKSMLHKVYDNEEIRNIYTAL
GVSVGTEEDSKALNMSKLRYHKVVIMTDADIDGSHISTLILTFFFRYMKELIEQGYVYIA
SPPLYLLKKGNKKVYAWNEKEREEKTLEMSADGKGVEVQRYKGLGEMNAEQLWETTLNPE
NRILKQVTIESIAEADNVFSMLMGDEVPPRREFIEQNAKYARIDA
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacaatcaatatacagcaagtagtatccaagccttagaggggatagagcacgtg
agaatgcgtccctctatgtacattggtgatgtaggtgaaacaggtttgcaccatttggtt
tcggaagtcgtggacaactcaatagacgaggcgttggcagggcattgcgataccattaaa
gtaaccattcacgagggaaattctatctcggtagtggataatgggcgtggtattccagta
gattttcacgagaaagaacaaaaatctgcccttgaagtagtaatgaccaaaataggtgca
ggaggtaagtttgataaagattcctataaagtttccggtggtcttcacggggtaggggta
tcttgtgtgaacgccctttctaccgatatgattacccgagtttaccgcgatggtaaaatc
tatcagcaaaaatatcaaagaggtaaagccgttaccgaagtagaagtggtgggcgaaacc
gacaaacgaggaacagaacagttttttcagccagatgataccatttttaatgaattggtg
tacaagtatgataaactttctacccgtcttcgtgaattggcgttccttaacaaaggtatt
accattaccctaaccgatgagcgtgaaacacaggaagatggaagctttaaaaccgaaact
ttctattccaaagaagggcttaatgagtttgtgaaatacatcgataatgccaaagaacct
cttatggaaacgcctatccatatcgaaagtaaggaaggggatgaaatcccagtagaagtg
gcattgaggtataacacctcttaccatagcaatatttactcttatgttaataatatcaat
acccgagatggtggtacgcacctttcagggtttagaagagctttaaccaatacctttaaa
aaatactcagaagaggtacttacagggaaggataaagaaattaaaatagagggtgaagac
ttcttagaagggcttacggcaattgtatccgtaaaggtgatggaaccacagtttgaaggg
caaaccaaaaccaaattaggaaactccgaagtatcaggggcggtatctagagtggtgagc
gaggctttgaaaaacttcttggaagaaaatccatcggaagctaaacttatcgtacagaaa
gtagtaacagcggcaaaagcccgtctagcagcacaaaaagcaagagaaaacatccaaaga
aaaacaccattgggtggtgcgggtctgccagggaaattagcagattgttcttctaaagac
ccagcgatttccgagatattcttggtagagggggattccgcggggggaacggcaaagcaa
ggcagagaccgtcattttcaagcaattcttccattgagaggtaaaatcttgaatgtggaa
aaatctatgctacacaaagtgtatgataacgaggaaatcagaaatatctatacagcactt
ggcgtttctgtgggtacagaggaagacagcaaagcacttaatatgtccaaattgagatat
cataaagtggtaattatgaccgatgctgatatcgatggttctcacatttccactttgatt
ttgactttcttcttccgatatatgaaagaactgatagagcaaggctatgtttacattgca
tcgccaccgctttaccttttgaagaaaggaaacaaaaaagtttacgcttggaatgaaaag
gaacgcgaagagaaaactctcgagatgtccgcagacggaaaaggagtggaagtacagcgt
tacaaaggtcttggagagatgaatgccgagcaactttgggagacaacgcttaatccagag
aacagaatcttaaagcaggtaaccatagaaagtattgctgaagcagacaatgtattctct
atgctaatgggtgatgaagtgccaccacgaagagagtttattgagcaaaatgctaagtac
gcaaggattgatgcgtaa
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