KEGG   Bergeyella porcorum: BPO_0348
Entry
BPO_0348          CDS       T09705                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III, subunit gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
bpor  Bergeyella porcorum
Pathway
bpor03030  DNA replication
bpor03430  Mismatch repair
bpor03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bpor00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BPO_0348 (dnaX)
   03430 Mismatch repair
    BPO_0348 (dnaX)
   03440 Homologous recombination
    BPO_0348 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bpor03032]
    BPO_0348 (dnaX)
   03400 DNA repair and recombination proteins [BR:bpor03400]
    BPO_0348 (dnaX)
Enzymes [BR:bpor01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BPO_0348 (dnaX)
DNA replication proteins [BR:bpor03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BPO_0348 (dnaX)
DNA repair and recombination proteins [BR:bpor03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BPO_0348 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNAX_ATPase_lid RuvB_N AAA_22 DNA_pol3_gamma3 AAA_30 AAA_14 AAA_5 Rad17 RCF1-5-like_lid AAA_7 nSTAND3 AAA_16 AAA_24 TIP49 DEAD RNA_helicase AAA_18 AAA_19 AAA_assoc_2 AAA_2 NPHP3_N GNAT_acetyltr_2 ABC_tran DUF815 DNA_pol3_delta_C AAA_11 DEXQc_Suv3 T2SSE SRP54 TsaE RsgA_GTPase AAA_33 Mg_chelatase Endonuc_subdom Pribosyl_synth Sigma54_activ_2 AAA_28
Other DBs
NCBI-ProteinID: WOC50995
UniProt: A0AAU0F4X5
LinkDB
Position
complement(369762..370850)
AA seq 362 aa
MENFIVSARKYRPQEFDTVVGQSHVTDTLEHAIDNNQLAQALLFCGPRGVGKTTCARILA
RKINEKDGSTSEDGFAYNIYELDAASNNSVDDIRELIDQVRFAPQVGKYKVYIIDEVHML
SNQAFNAFLKTLEEPPAHAIFILATTEKHKIIPTILSRCQIYDFKRITIEDIQEHLRKIA
DKEGIQYEDDALYLIAQKADGALRDALSIFDRLATFSQKNITLTKAAEVLNILDYDQYLN
IADLAKENDISGICSAFNEIIKKGFDAHIFIGGLGNHFRDLMMAQNPTTLNLIEVGEKTK
EKFATQAKSWTAQELIDAIEICNHADINYKNSKNPRLTVEIALMQLASLSVEGNPKKKSS
ES
NT seq 1089 nt   +upstreamnt  +downstreamnt
atggaaaattttatagtatcagcacgaaagtatcgtccacaggagtttgacaccgttgtg
gggcaatctcacgttactgatactctagaacacgctattgataacaatcagctggctcag
gcattattgttttgcgggcctcgtggggtggggaagaccacttgtgcaaggattctagca
aggaaaattaatgagaaagatggctctacctcggaagatggctttgcttacaatatttat
gaattggatgccgcttctaataactcggtggatgacatccgggagttgattgatcaagtg
cgttttgctccacaagtgggaaaatacaaagtctatattatagacgaggtgcatatgctt
tctaaccaagcatttaatgcttttcttaaaacattagaagaaccgcctgcccacgccatt
tttattttggcaactacggagaagcataaaattattcctaccattttgtcccgttgtcaa
atttatgactttaaaaggattacaatagaggacatccaagagcatttaagaaaaatagcg
gataaagaaggcatacaatatgaagatgatgccctttatcttattgctcagaaggctgat
ggagcccttcgggatgctttatccatctttgatagattggcgactttcagccagaaaaat
atcacccttaccaaggctgctgaggttctcaatattttagattacgaccaatatcttaat
attgcagatttagctaaagagaatgatatttctgggatttgttctgcgtttaacgaaatc
attaaaaaaggatttgatgctcatatttttattggaggattaggcaatcacttccgagat
ttgatgatggcacagaatcctacaacactcaatctgattgaagtaggagaaaaaactaag
gaaaaatttgccactcaagccaaaagttggacggcacaagagttaatagacgccatagag
atatgcaaccacgcagatattaattataaaaattctaaaaacccaagacttacggtggag
attgcgttgatgcaattggcatcgctatcggtagagggaaatcctaaaaaaaaaagttca
gaatcttag

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