Bergeyella porcorum: BPO_0762
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Entry
BPO_0762 CDS
T09705
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bpor
Bergeyella porcorum
Pathway
bpor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BPO_0762 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpor03019
]
BPO_0762 (rny)
Messenger RNA biogenesis [BR:
bpor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BPO_0762 (rny)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
AAA_15
DUF99
YKL065W-A
EIF4E-T
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
WOC51409
UniProt:
A0AAU0EZI3
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Position
832616..834187
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AA seq
523 aa
AA seq
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MTTTAIILGILGVMIGAVLGMFFSKSSLNSKAKFILDDAKKNADNLIEKASVQAESIKKE
KQLQAKEKFLELKSQHDADIQAREKKMHDAEKRIKDKEHKLNDELSKTGKLEKDLDKQIA
DYAKKTEILEKKQHELETITNQKVEILEKISGYTAEEAKAELVEAMKAEAKTRAQAHVQS
IMEEAQMNAKNEARKIVIQTIQRIGTEQAIENSVSVFNIESDEIKGRIIGREGRNIRALE
AATGVEIIVDDTPEAILLSCFDPVRREIARLSLHRLVTDGRIHPARIEEVVEKTRKQIEE
EIIEVGKRTIIDLGIHGLHPELLKIVGRMKYRSSYGQNLLQHSREVANIAATMAAELGLN
VKLAKRAGLLHDIGKVPEQESELPHALLGMQWAEKYGEHPEVINAIGAHHDEIEMTSLLS
PIIQVADGISGARPGARRQMLESYIQRLKDLEAAALSFDGVSSAYAIQAGRELRVMVESG
KVNDEQSAQLSYDISEKIQNELTYPGQVRVTVIRETRAVNIAR
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaaccgcgattattttaggaatattaggcgtgatgataggagctgttttggga
atgtttttttccaagagttcattaaactccaaggcaaaattcatattggacgatgctaag
aaaaacgctgataaccttatagaaaaagcctccgtacaggcagaaagcatcaagaaagag
aaacaacttcaggcaaaagaaaaattcttggaactgaaatctcagcacgatgcagatatt
caggctcgtgagaaaaaaatgcacgatgctgaaaaaagaatcaaagacaaagagcataag
ctgaatgatgagcttagcaaaacgggcaaactagaaaaagatttggataagcaaattgcc
gattatgccaagaaaacggaaatcttagagaaaaaacaacacgagctagaaacaattacc
aatcagaaagtagaaatccttgaaaaaatctctggctataccgcagaggaagccaaagca
gaactggtagaagcaatgaaggccgaagcgaaaacgagggctcaagctcacgtgcaaagc
attatggaggaagctcagatgaatgctaaaaacgaggctaggaaaattgtaatccagacc
attcaaagaattggaaccgagcaagcaatagaaaattcggtatcggtatttaatattgaa
tctgatgaaatcaaagggcgtatcattggtagagaaggtagaaacatccgtgcattggaa
gcggcaacaggcgtagaaatcattgtggacgatacgccagaagccatcctactctcttgt
tttgaccctgtgcgtagagaaattgccagattgtccctacaccgcttggtaaccgatggt
agaatccaccctgcaaggatagaggaagtggtggaaaaaaccagaaaacagattgaggag
gaaattatagaagttggaaaaagaaccattatcgatttaggcatccacgggctacatcca
gagctactgaaaatcgtaggacgaatgaaataccgttcatcttatgggcaaaacctcttg
caacactcccgtgaggtggcaaatatcgctgcaacaatggcagcagagctcggtctcaat
gttaagctagccaagagagctggtttactccacgatataggaaaagtaccagagcaagaa
tctgaattgccacacgcccttctcggtatgcaatgggcagaaaaatatggagagcatcca
gaggttatcaatgccattggagcccaccacgatgagattgaaatgacctctctactctca
ccaattatccaagtggcagatggtatttctggggcaagaccaggggcaagacgccagatg
ctagagtcttatatccaaagattgaaagacttagaagccgctgcattgagctttgatggg
gtatctagtgcatatgccattcaggcaggtagagagcttcgcgtgatggtggaaagtggc
aaggtaaatgatgagcaatcagcacaattatcttacgacatttcggagaaaatccagaat
gaactcacctatccagggcaagtaagggtaacggtaatccgagaaaccagagccgtgaat
atcgcgagataa
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