KEGG   Bergeyella porcorum: BPO_0762
Entry
BPO_0762          CDS       T09705                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
bpor  Bergeyella porcorum
Pathway
bpor03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bpor00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BPO_0762 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bpor03019]
    BPO_0762 (rny)
Messenger RNA biogenesis [BR:bpor03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BPO_0762 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B KH_2 AAA_15 DUF99 YKL065W-A EIF4E-T KH-I_KHDC4-BBP
Other DBs
NCBI-ProteinID: WOC51409
UniProt: A0AAU0EZI3
LinkDB
Position
832616..834187
AA seq 523 aa
MTTTAIILGILGVMIGAVLGMFFSKSSLNSKAKFILDDAKKNADNLIEKASVQAESIKKE
KQLQAKEKFLELKSQHDADIQAREKKMHDAEKRIKDKEHKLNDELSKTGKLEKDLDKQIA
DYAKKTEILEKKQHELETITNQKVEILEKISGYTAEEAKAELVEAMKAEAKTRAQAHVQS
IMEEAQMNAKNEARKIVIQTIQRIGTEQAIENSVSVFNIESDEIKGRIIGREGRNIRALE
AATGVEIIVDDTPEAILLSCFDPVRREIARLSLHRLVTDGRIHPARIEEVVEKTRKQIEE
EIIEVGKRTIIDLGIHGLHPELLKIVGRMKYRSSYGQNLLQHSREVANIAATMAAELGLN
VKLAKRAGLLHDIGKVPEQESELPHALLGMQWAEKYGEHPEVINAIGAHHDEIEMTSLLS
PIIQVADGISGARPGARRQMLESYIQRLKDLEAAALSFDGVSSAYAIQAGRELRVMVESG
KVNDEQSAQLSYDISEKIQNELTYPGQVRVTVIRETRAVNIAR
NT seq 1572 nt   +upstreamnt  +downstreamnt
atgacaacaaccgcgattattttaggaatattaggcgtgatgataggagctgttttggga
atgtttttttccaagagttcattaaactccaaggcaaaattcatattggacgatgctaag
aaaaacgctgataaccttatagaaaaagcctccgtacaggcagaaagcatcaagaaagag
aaacaacttcaggcaaaagaaaaattcttggaactgaaatctcagcacgatgcagatatt
caggctcgtgagaaaaaaatgcacgatgctgaaaaaagaatcaaagacaaagagcataag
ctgaatgatgagcttagcaaaacgggcaaactagaaaaagatttggataagcaaattgcc
gattatgccaagaaaacggaaatcttagagaaaaaacaacacgagctagaaacaattacc
aatcagaaagtagaaatccttgaaaaaatctctggctataccgcagaggaagccaaagca
gaactggtagaagcaatgaaggccgaagcgaaaacgagggctcaagctcacgtgcaaagc
attatggaggaagctcagatgaatgctaaaaacgaggctaggaaaattgtaatccagacc
attcaaagaattggaaccgagcaagcaatagaaaattcggtatcggtatttaatattgaa
tctgatgaaatcaaagggcgtatcattggtagagaaggtagaaacatccgtgcattggaa
gcggcaacaggcgtagaaatcattgtggacgatacgccagaagccatcctactctcttgt
tttgaccctgtgcgtagagaaattgccagattgtccctacaccgcttggtaaccgatggt
agaatccaccctgcaaggatagaggaagtggtggaaaaaaccagaaaacagattgaggag
gaaattatagaagttggaaaaagaaccattatcgatttaggcatccacgggctacatcca
gagctactgaaaatcgtaggacgaatgaaataccgttcatcttatgggcaaaacctcttg
caacactcccgtgaggtggcaaatatcgctgcaacaatggcagcagagctcggtctcaat
gttaagctagccaagagagctggtttactccacgatataggaaaagtaccagagcaagaa
tctgaattgccacacgcccttctcggtatgcaatgggcagaaaaatatggagagcatcca
gaggttatcaatgccattggagcccaccacgatgagattgaaatgacctctctactctca
ccaattatccaagtggcagatggtatttctggggcaagaccaggggcaagacgccagatg
ctagagtcttatatccaaagattgaaagacttagaagccgctgcattgagctttgatggg
gtatctagtgcatatgccattcaggcaggtagagagcttcgcgtgatggtggaaagtggc
aaggtaaatgatgagcaatcagcacaattatcttacgacatttcggagaaaatccagaat
gaactcacctatccagggcaagtaagggtaacggtaatccgagaaaccagagccgtgaat
atcgcgagataa

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