Bergeyella porcorum: BPO_1158
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Entry
BPO_1158 CDS
T09705
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bpor
Bergeyella porcorum
Pathway
bpor03030
DNA replication
bpor03430
Mismatch repair
bpor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BPO_1158 (dnaQ)
03430 Mismatch repair
BPO_1158 (dnaQ)
03440 Homologous recombination
BPO_1158 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpor03032
]
BPO_1158 (dnaQ)
03400 DNA repair and recombination proteins [BR:
bpor03400
]
BPO_1158 (dnaQ)
Enzymes [BR:
bpor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BPO_1158 (dnaQ)
DNA replication proteins [BR:
bpor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BPO_1158 (dnaQ)
DNA repair and recombination proteins [BR:
bpor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BPO_1158 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MotCF
Motif
Other DBs
NCBI-ProteinID:
WOC51805
UniProt:
A0AAU0F249
LinkDB
All DBs
Position
complement(1185087..1185929)
Genome browser
AA seq
280 aa
AA seq
DB search
MGKLVKSLGIPLVEHHRAGGDARATLDLFKLLITKDVDNEIIQKQYEETNAKTYVNKIRE
LTQDLPNEQGIVYFQDGEGKILFSDFVDDINRFAKKIFNSKAKKFLAVQENTEQVHYEIS
GNSLVAQLLMASKGIRRKGVLPFGLYHRNGKYFVEKNTLRKTEKPLLKFKSFTQGLKALN
YIKSREEFNDSEQFKALMELKHRSELWLIAGRTMGERAFLILNNGVVEAYGFYELHTQIQ
TLSKLSHLKIPVKITTEDFTNELKMVLLKGELKIQPLPQK
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
ttgggaaaattagtaaaatcattggggattcccttagtggaacatcatcgtgcaggaggc
gatgcaagggcaactttggatttgtttaaattgttgataactaaggatgttgataatgag
attatccaaaaacaatacgaagaaaccaacgccaagacttatgtgaataaaatccgagag
ttgacacaggatttgcccaatgagcaagggattgtctattttcaagatggggaagggaag
attctcttttcagattttgtggatgatatcaatcggtttgcgaagaaaattttcaattct
aaggctaaaaaatttctggctgttcaggagaataccgagcaggtgcattatgaaatttca
ggaaactccctcgtggctcagttgctgatggcgtccaagggtattcggagaaaaggtgtt
ttgccatttgggctgtaccatcgcaatggaaaatactttgtggagaaaaatacactccgt
aaaacagaaaaaccattgttgaagttcaaatcgtttacgcagggtttaaaggcattgaat
tacatcaaatctcgtgaggagtttaatgatagtgagcaatttaaagctttgatggaattg
aaacatcgctcagagctatggcttattgcgggtagaacgatgggagaaagagcatttttg
attctgaacaatggagtggtggaggcgtatggcttctacgaacttcatacgcaaatacag
actttgtctaagctcagtcaccttaaaattcccgtgaaaataactacggaagattttacc
aacgagctgaaaatggtattactgaaaggagaactgaaaatacaaccattaccacagaaa
taa
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