Bergeyella porcorum: BPO_1160
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Entry
BPO_1160 CDS
T09705
Name
(GenBank) ATPase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
bpor
Bergeyella porcorum
Brite
KEGG Orthology (KO) [BR:
bpor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpor03400
]
BPO_1160
DNA repair and recombination proteins [BR:
bpor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
BPO_1160
BRITE hierarchy
Motif
Pfam:
HerA_C
DUF87
TrwB_AAD_bind
AAA_22
AAA_10
AAA
ResIII
AAA_16
FtsK_SpoIIIE
Zot
AAA_7
AAA_30
AAA_19
Motif
Other DBs
NCBI-ProteinID:
WOC51807
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Position
complement(1186328..1187929)
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AA seq
533 aa
AA seq
DB search
MIGLLFFIQDFLLLLSFNFESMADKAKFIEELNARYTAKGESIILGKGILDGEVIPEVGV
ALPLKTINRHGLIAGATGTGKTKTVQVFVEQLSHAGIPSLVMDIKGDFSGIAMPGKENDI
IKDRYAKTQLNWQAQGFLWKLMSISGKDGVKLRATVTEFGPVLLSKILELNDTQSSIMSI
VFKYCDDKGLPLIDLDDLKKVLQYVTENPQGKAELAKDYGSISPASLGAILRSIVALEQQ
GATQFFGEPSFDVEDLLQQRDGKGVVNVFRVSDILTQPQLFSTFMLSLFAEIYMTFPEVG
DAGKPKLVLFIDEAHLIFKEASKALLSQIETMVKLIRSKGVGIYFITQIPGDVPENVLSQ
LGLKIQHALRGFTAKDRKEIDKAVQNYPLTEYYETSQLIQNLGIGEAFVTALDEKGIPTP
LVHTYLISPESRMDVLEDSAIKTLTAQSDLVAKYNQTVNKESAYELLTKEWNKRWRKLLK
PKPQRGKTTEKPEPNLLESVMGSKMGRTFTTTLAREGAKFVLGMPGLGGRKRR
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
gtgataggtttgttattttttattcaagattttttattacttttatcttttaattttgaa
agtatggctgataaagcaaaatttatagaagagcttaatgcgagatataccgcaaaaggg
gagagtattattttaggaaaaggaatattggatggtgaggtaattccagaagtaggcgta
gccttaccactgaaaaccattaatagacacggacttatagcaggagctacgggaacggga
aaaaccaaaaccgttcaggtatttgtagagcaactatcacacgcggggattccttctttg
gtgatggatatcaaaggtgatttttctggaattgcaatgccagggaaggagaacgatatc
atcaaagaccgctatgctaaaacccaactcaactggcaagctcaaggtttcctgtggaaa
ctgatgtccatttcagggaaagatggggtgaaacttcgggctacggtaacggaatttggt
cctgttttactttctaaaatattggagctgaacgatacgcaatccagcattatgtctatc
gtattcaaatattgtgatgacaaagggctgccgcttatcgatttagacgatttgaaaaaa
gtccttcaatatgttaccgaaaatccacaaggtaaagccgagttggctaaagattatggt
tctatctctccagcatctttgggagctattttgcgttccattgtggcgttggaacagcag
ggagctacgcagtttttcggggagccaagctttgatgtggaagaccttttgcagcaacgc
gatggtaaaggtgtggtgaatgttttccgtgtgtctgatattcttactcaaccgcagttg
ttctctacctttatgctatcattgtttgcggagatttatatgacttttccagaggtgggt
gatgctgggaaaccgaagttggttcttttcatcgatgaagctcatttgatattcaaggag
gcttccaaggctttgctttcgcagattgaaacaatggtgaagcttatccgttctaagggt
gttggcatttatttcattacccaaattccaggcgatgtgccagagaatgttttatcacaa
ttgggcttgaaaatccagcacgccctccgtggttttacagcaaaagaccgaaaagaaatt
gataaagcggtgcaaaactatccgctgacagagtattacgaaaccagtcagctgattcag
aatttgggaattggagaagcctttgttacggcattagatgaaaaggggattcctacgcct
ttggtgcatacttatctgatttctccagaatctcgtatggatgtcctagaggatagtgcg
ataaaaactttaaccgctcaatctgatttggtagcgaagtataaccaaactgtgaacaaa
gaatctgcatacgaactgcttaccaaagaatggaacaagcggtggcgcaaactcctgaaa
ccaaaaccacaacgaggaaaaaccaccgagaagccagagcctaatctgttggaaagcgta
atgggtagcaagatgggacgcacttttacaactaccttagcaagagaaggagctaagttt
gtgctgggaatgcctggattgggaggaagaaagcggaggtaa
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