Bergeyella porcorum: BPO_1863
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Entry
BPO_1863 CDS
T09705
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bpor
Bergeyella porcorum
Pathway
bpor03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bpor00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BPO_1863 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpor03021
]
BPO_1863 (rpoA)
03400 DNA repair and recombination proteins [BR:
bpor03400
]
BPO_1863 (rpoA)
Enzymes [BR:
bpor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BPO_1863 (rpoA)
Transcription machinery [BR:
bpor03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BPO_1863 (rpoA)
DNA repair and recombination proteins [BR:
bpor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BPO_1863 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
WOC52510
UniProt:
A0AAU0F3J0
LinkDB
All DBs
Position
1639861..1640856
Genome browser
AA seq
331 aa
AA seq
DB search
MAILQFIKPDKVILLNSDDFKGQFEFRPLEPGFGLTIVNALRRVLLSSLEGYAISSIKIE
GVEHEFSTIPGVVEDVTEIILNLKQLRLKAKVENQAAEQVVAKVSGQTQVTAGDLGKTMA
GFEVLNPDLVICNMTTDVNFEITFNIDKGRGYVPSDQNKSHNAPIGTIAIDSIFTPIKKV
QYSIENYRVEQKTDYEKLVLDIETDGSITPQNALTEASKILIYHFMLFSDERITLETEAV
KASIQYDEETLHTRQLLKSKLADMDLSVRALNCLKAAEVETLGELVSYSKSDLMKFRNFG
KKSLTELEELVHSKGLNFGFDVAKYKLDADK
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcaattttacaattcataaaacccgataaagtaatccttttgaattccgacgatttt
aaaggtcaatttgagttcagacctttagaaccaggattcgggcttaccatcgtaaatgct
ttgaggagagtgttgctttcttctcttgaaggatatgctatttcatctatcaaaattgaa
ggtgtagagcacgagttttcaacaattccaggagtggtagaggatgttaccgaaatcatt
ctgaatttaaagcaattgcgtcttaaagcaaaagtagaaaatcaagctgcggaacaagta
gtggctaaggtttctggacaaacccaagtaactgccggtgatttaggtaaaacaatggca
ggttttgaagtgctaaatccagatttggtgatttgtaatatgacaacagatgtcaatttt
gaaattactttcaatatcgacaaaggtagaggctatgtgccttctgatcaaaacaaatct
cacaatgcccctatcggtaccatcgctattgattctatctttacgccaattaagaaagtt
caatactcgattgaaaactaccgtgtagagcaaaaaacagactacgaaaaattggtattg
gatatcgaaactgatggatctattacacctcagaatgctcttactgaagcttctaagatt
ttgatctatcactttatgctgttctctgatgaaagaattactcttgaaacagaagcggtg
aaagcgtccatccaatacgatgaagaaacattacatacaagacaactattgaagtccaaa
ttggcagatatggatttatctgtaagagctctaaactgtttgaaagcggctgaagtagaa
actcttggagaacttgtttcttacagtaagtctgatttgatgaaatttagaaatttcggt
aagaaatctttaacagaattagaagaattagtgcattcaaaaggtcttaacttcggtttt
gacgttgcaaagtataaactagatgctgataaataa
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