Bergeyella porcorum: BPO_2222
Help
Entry
BPO_2222 CDS
T09705
Symbol
hupB
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
bpor
Bergeyella porcorum
Brite
KEGG Orthology (KO) [BR:
bpor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpor03032
]
BPO_2222 (hupB)
03036 Chromosome and associated proteins [BR:
bpor03036
]
BPO_2222 (hupB)
03400 DNA repair and recombination proteins [BR:
bpor03400
]
BPO_2222 (hupB)
DNA replication proteins [BR:
bpor03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BPO_2222 (hupB)
Chromosome and associated proteins [BR:
bpor03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
BPO_2222 (hupB)
DNA repair and recombination proteins [BR:
bpor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
BPO_2222 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
HU-HIG
RCS1
Motif
Other DBs
NCBI-ProteinID:
WOC52869
UniProt:
A0AAU0F286
LinkDB
All DBs
Position
complement(1996755..1997024)
Genome browser
AA seq
89 aa
AA seq
DB search
MAADAGITKVAAKAALESFIANVQKTLQNDGKVALVGFGTFSVSERAARQGINPATKQPI
KIEAKKVAKFKAGAELADAVAAGAKKKKK
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagatgccggtatcactaaagtagcagctaaagcagctcttgaatctttcatc
gctaatgtgcaaaaaactttgcaaaatgatggtaaagtagctttagtaggttttggaaca
ttctctgtttctgaaagagctgcaagacaaggtattaatcctgcgactaagcaaccaatt
aaaattgaagctaaaaaagtagctaaattcaaggctggtgctgagttagctgacgctgta
gcagctggtgctaagaaaaagaaaaagtaa
DBGET
integrated database retrieval system
