Brucella pinnipedialis B2/94: BPI_I1320
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Entry
BPI_I1320 CDS
T01589
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bpp
Brucella pinnipedialis B2/94
Pathway
bpp03410
Base excision repair
bpp03430
Mismatch repair
bpp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BPI_I1320 (recJ)
03430 Mismatch repair
BPI_I1320 (recJ)
03440 Homologous recombination
BPI_I1320 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpp03400
]
BPI_I1320 (recJ)
DNA repair and recombination proteins [BR:
bpp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BPI_I1320 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BPI_I1320 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BPI_I1320 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
CDC45
Motif
Other DBs
NCBI-ProteinID:
AEK54584
LinkDB
All DBs
Position
1:complement(1260036..1261820)
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AA seq
594 aa
AA seq
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MTTERFFLGVKQSATGQKWVDRLGPREANTALAIAQHHGISDLVARVLAGRGVSVEGAPE
FVDPTLRNLMPDPATLNDMDNAAGRIADAIQRRETVAIFGDYDVDGACSSALMARFLKHY
GVQHSIYIPDRIFEGYGPNPDAMRELAAKGASLIVTVDCGTNSVPSITAAKQAGADVVVL
DHHQVGGDLPEDAVAIVNPNREDDISQQGHLCAAGVVFLALVQVAKILRARGKGPGPDLL
SMLDLVALATVCDVVPLKGVNRAFVVKGLLVARGQSNVGLAALARVARIGEPLNAFHLGY
LIGPRINAGGRIGDAGLGARLLTLDDPAMADRIAMELDRLNQERQAMEAEMLMEAEAEAS
LEISGGAGASVIVTASDRWHPGIVGLLASRLKEKARRPAFAIAFNANGVGSGSGRSISGL
DLGKLVRGAVEKGLLVKGGGHAMAAGITIERGNLGALRAYLEEEAADIVSRLRENQSLSI
DGALAASGATVALYEALQKAGPYGSAHPQPLLALPHHVLADVRGVGRDHVRVTLRGADGK
RVNAIAFRAAEGDLGRFLFNNIGCSVHVAGNLSLNHWNGSVSPQIQILDAALPV
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgacaacagagcgttttttcctcggagtgaaacaatccgcaaccggccagaaatgggtg
gatcggctgggtccgcgtgaagccaatacggcacttgccattgcacagcatcatggcatt
tccgatctggttgcgcgtgtgcttgcggggcggggggtgtccgtggaaggggcgccggaa
tttgtcgatccgacgttgcgcaatctcatgcccgacccggcgacgctcaacgacatggac
aatgcggcggggcgcattgccgatgcgatccagcgccgcgagacggtcgcgatctttggc
gattatgatgtggacggcgcgtgttcttccgcgctgatggcgcggtttctcaaacattac
ggtgtccagcattccatctatatccccgaccggattttcgagggctatggccccaatccc
gatgcgatgcgggaactggccgccaagggagcaagcctgatcgttacggtcgattgcggc
accaacagcgtgccgtccatcaccgccgccaaacaggccggggcagatgtcgtcgtgctt
gaccaccatcaggtcggcggcgatctgccggaagatgcggtggcgatcgtcaatcccaac
cgtgaagacgatatttcgcagcaaggccatctctgcgcggcaggcgtggttttcctggca
ttggtgcaggtggccaaaatcctgcgcgcgcgcggcaaggggccggggcctgaccttctt
tccatgcttgatctcgttgcactggcgacggtttgcgatgtggtgccgctcaagggcgtc
aaccgcgcctttgtggtgaagggcctgctcgttgcccgcgggcaaagcaatgtcggcctg
gcggcgctggcgcgcgttgcgcgcatcggggagccgctcaatgcctttcatctggggtat
ctgatcggtccgcgcatcaatgcgggtgggcgcattggcgatgcgggcttgggcgcgcgc
cttctcacgctggatgacccggcaatggcggatcgcattgcaatggaactcgacaggctc
aatcaggaacggcaggccatggaggccgaaatgctcatggaggcggaagcggaagcttcg
ctggagatttcgggcggggcgggcgcatccgtgatcgtaacggccagtgaccgctggcat
ccgggcattgtcggcctgctagcctcccggctgaaggaaaaggcgcggcgtccggccttt
gctattgcattcaacgccaatggtgtcggctccggctcggggcgttcgatttcaggtctt
gatctgggcaagctggtgcgcggtgcggtggaaaagggcctgctggtgaagggcggtggc
catgccatggcggcgggcattaccattgagcgcggcaatcttggcgcgctgcgcgcctat
ctggaagaagaagccgcggatatcgtgtcgcgcttgcgtgaaaaccagagcctttccatc
gatggggcgctggctgcatccggtgcgaccgtggcgctttatgaagctttgcagaaagcc
ggtccttatggttctgcgcatccgcagcccctgttggcgctgccgcatcatgtgctggcc
gatgtgcggggcgtcgggcgggatcatgtgcgggtgacattgcgcggggcagacggcaag
cgggtcaatgcgatcgcatttcgagcggcagaaggcgatcttggacgcttcctgttcaac
aatatcggctgcagtgtgcatgtggccggaaatctttctctcaaccattggaatggttct
gtttctccccaaatccagattctggatgcggctttgcctgtttaa
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