Brucella pinnipedialis B2/94: BPI_I2115
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Entry
BPI_I2115 CDS
T01589
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bpp
Brucella pinnipedialis B2/94
Pathway
bpp03030
DNA replication
bpp03430
Mismatch repair
bpp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BPI_I2115 (holA)
03430 Mismatch repair
BPI_I2115 (holA)
03440 Homologous recombination
BPI_I2115 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpp03032
]
BPI_I2115 (holA)
03400 DNA repair and recombination proteins [BR:
bpp03400
]
BPI_I2115 (holA)
Enzymes [BR:
bpp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BPI_I2115 (holA)
DNA replication proteins [BR:
bpp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BPI_I2115 (holA)
DNA repair and recombination proteins [BR:
bpp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BPI_I2115 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
AEK55336
LinkDB
All DBs
Position
1:2011817..2012860
Genome browser
AA seq
347 aa
AA seq
DB search
MAQKKAHEVDSFLARPTSSFPVVLLYGPDKGLVNERARRYAAASKLPLDDPFAVIRMEAD
EIEADPAKLADEAGTISMFGGQRLIWIKNAGGQKKLAEAVKRLAAEPPQETFILIEAGDL
KKGAGLRSAVENASAGMALPCYSDDARGIDGVIDDILAEWKMQITLDARQLLRASLGGDR
LATRGELEKLCLYTRGKERIDIDDVREAVGDVAGLSTDEVVDAVLAGDLPRFEIAFDRVV
KSGTAPFLLLTAAMRQFQQVQALRHIADTERKSASMVVASARPPIFFNRKKLIETAISRW
TGESLTRVMERLQRAVLESRRNAALSVPIIRQCLLAISVESLRNARR
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaaaagcacacgaagtcgacagctttctggcgcggccgacaagttcattt
ccggtcgtgcttctctacggtcccgacaaggggctggtgaatgagcgcgcacgccgttat
gccgcagcaagcaagctgccactcgacgatccctttgccgtgatccgcatggaggccgat
gagatcgaggccgatccggcaaaacttgccgacgaagccggcacgatttccatgttcggc
gggcaacgcctgatctggatcaagaacgctggcggccagaagaagctggccgaggccgtg
aaacggcttgcagctgagcccccgcaggaaaccttcattctgattgaagcaggcgatctc
aaaaagggtgcaggcttgcgcagcgccgttgagaatgcttcagcaggcatggccctgccc
tgctattccgatgatgcgcgcggcatagacggcgtgatcgacgatattcttgccgagtgg
aagatgcagatcacgcttgatgcgcgccagcttctgcgcgccagccttggcggcgaccgg
ctggcgacgcgcggcgagctggaaaaactctgtctctatacccgcggcaaggaacgcatc
gacattgatgatgtgcgtgaagcggtgggcgatgttgcggggctctcaaccgacgaagtg
gtcgatgcggttctggctggggatcttccgcgttttgagattgcgtttgaccgggtcgtc
aaatccggcaccgcgccctttcttctgctcactgcggccatgcgccagttccagcaggtg
caggcattgcgccatatcgccgataccgagcgcaaaagcgcctccatggtggtcgcaagc
gcaagaccgcccatttttttcaatcgaaaaaagctgatcgaaaccgccattagccgctgg
accggcgaaagcctcacccgcgtcatggaacggcttcagcgcgccgtactggaaagccgc
cgaaacgcagccctttccgtaccgatcatccgccaatgcctgcttgcgatcagcgtagag
tcgcttcgcaatgccaggcgatag
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