Burkholderia pseudomallei BPC006: BPC006_I1254
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Entry
BPC006_I1254 CDS
T02301
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bpq
Burkholderia pseudomallei BPC006
Pathway
bpq03030
DNA replication
bpq03430
Mismatch repair
bpq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BPC006_I1254
03430 Mismatch repair
BPC006_I1254
03440 Homologous recombination
BPC006_I1254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpq03032
]
BPC006_I1254
03400 DNA repair and recombination proteins [BR:
bpq03400
]
BPC006_I1254
Enzymes [BR:
bpq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BPC006_I1254
DNA replication proteins [BR:
bpq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BPC006_I1254
DNA repair and recombination proteins [BR:
bpq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BPC006_I1254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
RecG_wedge
Motif
Other DBs
NCBI-ProteinID:
AFR15139
LinkDB
All DBs
Position
I:1216201..1219905
Genome browser
AA seq
1234 aa
AA seq
DB search
MIEPDDPNPRSEPATRAAANCRRARLRGPPPAPVLARRPTRRFFARRERYRVPGPATIAP
MSDPRFVHLRVHSEFSIADGIVRLDDIVKSAAEDGQGALALTDLGNAFGLVRFYKEARDA
GIKPIAGCDVWITNHDDRDKPSRLLLLVKDKRGYLNLCELLSKAWLTNQYRGRAELDASW
LEGELAEGLLALSGAQQGDIGLALAAGNEAAARRHAQRWARVFPGGFYIELQRYGQPGGE
AYIQQAVTIAAELKLPVVATHPLQYMTADDFTAHEARVCISEGDILANPRRQKRFTTEQF
FRTQGDMAALFADLPSALANTVEIAKRCNLTLELGKPKLPRFPTPDGMSLDDYLVQLSQE
GLDKRLVQLYPDEAEREAQRGKYNQRLDFECGTIKKMGFPGYFLIVADFINWAKNNGVPV
GPGRGSGAGSLVAYSLGITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQHGRDRVIQYV
KEKYGADAVSQIATFGTMAAKAAVRDIGRVLDLGYMFTDGVAKLIPFKPGKHVTIADAMK
EEPLLQERYDNEDEVHQLLDLAQRVEGLTRNVGMHAGGVLIAPGKLTDFCPLYTQGDEGG
VVSQYDKDDVEAVGLVKFDFLGLTTLTILDWAERYIRRLDPSKENWSLAQVPLDDPTSFQ
ILKKANTVAVFQLESRGMQGMLKDAQPDRFEDIIALVSLYRPGPMDLIPSFCARKHGREK
VDYPDPRVEPVLKETYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKKKPEEMAKHRE
IFAEGAAKNGLTREKSDEIFDLMEKFAGYGFNKSHAAAYALLAYYTAWLKAHHPAEFMAA
NMTLAMDDTDKVKILFDDCLVNGLAVLPPDINRSNYRFEPVAEADGKRSRTIRYGLGAIK
GSGQNAIEEILRAREEKPFADLFDFCERIDRRVVNRRTIEAMIRAGAFDSLHENRAQLLA
SVPLAMEAAEQAAANALQAGLFDIGGVPAHQHALVDEPAWDDKRRLQEEKGALGFYLSGH
LFDAYRDEVRRFVRQKLGELKEGRDKVVAGVIASLRTQMTQRGKMVIALLDDGTGQCEVT
VFNEQFDANRALFKEDELLIVQGQARNDAFTGGIRFTAESVMDLERARSRYAQAVRMTMN
GNADAAALRRVLEAHVAKPDETPPAAAPAPRGGRDGGRRAQAAIPNGLAVRIAYSNARAQ
GEMRLGDAWRVKPSDALLADLRAAFGGSVVEIVY
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaacccgacgatccgaatccgcgatcggagccggccacgcgcgccgcggcgaac
tgccgtcgtgcgcggcttcgcggcccgccgcccgcgccggtcttggcccgacggccaacg
cggcgattttttgcccgccgcgaacggtatcgggttcccgggccggctacaatagcgccc
atgtcagatccccgtttcgttcacctccgcgtccactccgaattctcgattgccgacggc
atcgtgcgtctcgacgatatcgtcaagtcggcggccgaagacggtcagggcgcgcttgca
ctgaccgacctcggcaacgcgttcggtctcgtccgtttctacaaggaagcccgcgatgcg
ggcatcaagccgatcgccggctgcgatgtctggatcaccaaccacgacgatcgcgacaag
ccgtcgcggctgctgctgctcgtcaaggacaagcgcggctacctgaacctctgcgagctg
ctgtcgaaggcgtggctcacgaaccaataccgcggccgcgcggagctcgacgcgagctgg
ctcgaaggcgagctcgccgaagggctgctcgcgctgtcaggcgcgcagcagggcgacatc
ggcctcgcgctcgcggcgggcaacgaggcggccgcgcgccgccacgcgcagcgctgggcg
cgggtgttcccgggcggtttctatatcgaattgcagcgctacggccagccgggcggggaa
gcgtacatccagcaggcggtgacgatcgcggcggagctgaagctgcccgtcgtcgcgacg
catccgctgcagtacatgacggccgacgatttcaccgcgcacgaggcgcgcgtgtgcatc
tcggaaggcgacatcctcgcgaatccgcgccgccagaaacgcttcacgaccgagcagttc
ttccgcacgcagggcgacatggccgcgctgttcgccgatctgccctcggcgctcgcgaac
acggtcgagatcgccaagcgctgcaacctgacgctcgagctcggcaagccgaagctgccg
cggttcccgacgcccgacggcatgtcgctcgacgactacctcgtgcagttgtcgcaggaa
gggctcgacaaacgcctcgtgcagctctacccggacgaggccgagcgcgaagcgcaacgc
gggaagtacaaccagcgtctcgatttcgagtgcggcacgatcaagaagatgggctttccg
ggctacttcctgatcgtcgcggacttcatcaactgggcgaagaacaacggcgtgccggtg
ggccccgggcggggctcgggcgcgggctcgctcgtcgcgtattcgctcggcatcaccgat
ctcgatccgctgcgctacaacctgctgttcgagcgcttcctgaacccggagcgggtgtcg
atgcccgacttcgacatcgacttctgccagcacggccgcgaccgcgtgatccagtacgtg
aaggagaagtacggcgcggacgcggtgtcgcagatcgccaccttcggcacgatggccgcg
aaggcggccgtgcgggatatcggccgggtgctcgatctcggctacatgttcaccgacggc
gtcgcgaagctgatcccgttcaagccgggcaagcacgtgacgatcgccgacgcgatgaag
gaagagccgctcctgcaggagcgctacgacaacgaggacgaagtccatcagttgctcgat
ctcgcgcagcgcgtggagggcctcacgcgcaacgtcgggatgcacgcgggcggcgtgctg
atcgcgcccggcaagctgaccgatttctgccccctctacacgcagggcgacgaaggcggc
gtcgtcagccagtacgacaaggacgacgtcgaagccgtcggcctcgtgaagttcgacttt
ctcggcctcacgacgctcacgattctcgactgggccgagcgctacattcgccgtctcgat
ccgagcaaggagaactggtcgctcgcgcaggtgccgctcgacgatccgacgtcgttccag
atcctcaagaaggccaacacggtcgccgtgttccagctggaaagccgcggcatgcagggg
atgctgaaggacgcgcagcccgaccgcttcgaggacatcatcgcgctcgtgtcgttgtac
cggccgggcccgatggacctgattccgagcttctgcgcgcgcaagcacgggcgcgagaag
gtcgactatccggatccgcgcgtcgagcctgtcctgaaagagacctacgggatcatggtc
tatcaggagcaggtgatgcagatggcgcagatcatcggcggctattcgctcggcggcgcg
gacttgctgcgtcgcgcgatgggcaagaagaagcccgaggagatggccaagcaccgcgag
atcttcgccgagggcgccgcgaagaacggcctcacgcgcgagaagtccgacgagatcttc
gacctgatggagaagttcgcgggctacggcttcaacaagtcgcacgcggccgcgtacgcg
ctgctcgcgtattacaccgcgtggctgaaggcgcaccatccggccgaattcatggcggcc
aacatgacgctcgcgatggacgacaccgacaaggtgaagatcctgttcgacgattgcctc
gtcaacggcctcgccgtgctgccgcccgacatcaaccgttcgaactatcgcttcgagccc
gtcgccgaggccgacggcaaacgctcgcgcacgatccgctacggcctcggcgcgatcaag
ggcagcggccagaacgcgatcgaggagatcctgcgcgcacgcgaggaaaagccgttcgcc
gatctgttcgatttctgcgagcggatcgaccgccgcgtcgtgaaccgccgcacgatcgaa
gcgatgattcgcgcgggcgcattcgattcgctgcacgagaatcgcgcgcagttgctcgca
tcggtgccgctcgcgatggaggccgccgagcaggcggccgcgaacgcgctgcaggcgggc
ctgttcgacatcggcggcgtgcccgcgcaccagcatgcgctcgtcgacgagccggcgtgg
gacgacaagcgtcgcctgcaggaagagaagggcgcgctcggcttctacctgtccggccat
ctgttcgacgcgtatcgcgacgaggtgcgccgtttcgtgcgccagaagctcggcgagctg
aaggaagggcgcgacaaggtggtggccggcgtgatcgcgtcgttgcgcacgcagatgacg
cagcgcggcaagatggtgatcgcgttgctcgacgacggcaccggccagtgcgaagtcacc
gtgttcaacgagcagttcgacgcgaaccgcgcgctcttcaaggaggacgaactgctgatc
gtccaggggcaggcgcgcaacgacgcgttcacgggcggaattcgcttcaccgccgagtcg
gtgatggacctcgagcgtgcgcgcagccgctacgcgcaggcggtgcggatgacgatgaac
ggcaacgcggacgcggcggcgctgcgccgcgtgctggaagcgcacgtcgcgaaacccgac
gagacgccgcccgccgcggcgccggcgccgcgcggcggccgcgacggcgggcggcgggcg
caggcggcgataccgaatggtctcgccgtgcggatcgcatacagcaacgcgcgtgcgcaa
ggcgagatgcgcctgggcgacgcatggcgcgtgaagccgagcgacgcgttgctcgccgat
ctgcgcgcggcgttcggcggcagcgtcgtcgagatcgtctactga
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integrated database retrieval system
