Burkholderia pseudomallei BPC006: BPC006_I1436
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Entry
BPC006_I1436 CDS
T02301
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bpq
Burkholderia pseudomallei BPC006
Pathway
bpq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BPC006_I1436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpq03400
]
BPC006_I1436
Enzymes [BR:
bpq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BPC006_I1436
DNA repair and recombination proteins [BR:
bpq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BPC006_I1436
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
SH3_13
NAT10_TcmA_helicase
SLFN-g3_helicase
RecD_N
DEAD
MukB
Motif
Other DBs
NCBI-ProteinID:
AFR15315
LinkDB
All DBs
Position
I:1399799..1402465
Genome browser
AA seq
888 aa
AA seq
DB search
MVDERFAWTGGLADRLPEPADFGLALAEGFARRIGMLSRRVGASAAAARWAARAAFAASR
ATAAGHVCVALRALAQRYDEPYDDVRAALAASGVTAFDGIVRGGECPLVVDRDGRLYLAR
YFEYETRLANALVERSRCGGAPAGGADALSPDALGERLVRYFGPQKERGVDWQRVAALIA
LTGRVTIVSGGPGTGKTTTVVGVIACLLDAHPELRIALAAPTGKAAQRMQEALHARAGSL
PAELAARLPRTSCTLHRLLGGGPGGRFAHHRDNPLPYDLVVVDEASMIDVALAAHLLAAL
APNARLVLLGDKDQLAAVEAGAVFAELSARPAFSPATCATIARALGVGEAEFVAALPDGF
VVQAAGAERVADARAAAADMDAAARGTAGAAAAAARATAAAAARMTTAAAAARGAAPAPH
AGRRGGGRASNRTVDDAQGSLFAFDDDAFGVGTSGGEPGAGAQGAGRRDGGAPSLDGPHA
GHRDGGASPGVAHSRRDAFDARARSGPADVSDLENAARAYAPAGAAGPADSPADASFVEP
AAWIEADELAWLDNAVFSFSEGASANAEADGRRSAAATATDADARTAPPVAREATAPTPR
ETARSDGSAVAPLTDCVVWLERNYRFGLDSPIGRLSLAIRRGAVQDALDALSTQDDAAAR
FSDDGGATLSAATVEQLARGFAGYAAALRDALATPEPDALPLFDVLNRFRVLCATRTGAR
GAEEVNARMAAEVRRAVRVPLALGAHWFAGRPVMVTRNDYALGLFNGDIGIALPGARGAL
RVWFRGADGRARAVSPAALPPHDTAFALTVHKSQGSEFDDAALILPASFNRVLSRELVYT
AITRARARVQVIGSRAVLALAIATRTARDSGLAARIADALRARQEGAR
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgacgaacgtttcgcgtggacgggcggcctggcggaccgtctgcccgagccggcc
gatttcgggctcgcgctcgccgaaggcttcgcgcgccggatcgggatgctgtcgcggcgt
gtcggcgcgagcgccgcggccgcgcgctgggcggcacgcgcggcgttcgccgcgagccgc
gcgacggcggcggggcacgtatgcgtcgcgctgcgcgcgctcgcgcagcgctacgacgag
ccgtacgacgacgtacgcgcggcgctcgccgcgagcggcgtgaccgcgttcgacggcatc
gtgcgcggcggcgagtgcccactcgtcgtcgatcgcgatggtcggctgtatctcgcgcgc
tacttcgaatacgagacgcggctcgcgaacgcgctcgtcgagcggagccgatgcggcggc
gcgccggcgggcggcgccgatgcgctctcgcccgacgcgctcggcgagcggctcgtccgc
tatttcgggccgcagaaggagcggggcgtcgattggcagcgcgttgcggcgctcatcgcg
ctcacgggccgcgtgacgatcgtgagcggcgggccgggcaccggcaagacgacgacggtc
gtcggcgtgatcgcgtgcctgctcgatgcgcatccggagttgcggatcgcgcttgccgcg
cccaccggcaaggccgcgcagcggatgcaggaggcgctgcacgcgcgcgccggcagcctg
ccggcggaactcgcggcgcgcctgccgcgcacgtcctgcacgctgcaccggctgctgggc
ggtggcccgggcgggcgcttcgcgcaccaccgcgacaatccgctgccgtacgatctcgtc
gtcgtcgacgaggcttcgatgatcgacgtcgcgctcgccgcgcatttgctcgccgcgctc
gcgccgaacgcgcgcctcgtgctgctcggcgacaaggatcagctcgcggccgtcgaggcg
ggcgcggtgttcgccgagctgagcgcgcgtcccgcgttcagcccggcgacgtgcgcgacg
atcgcgcgcgcgctcggcgtcggcgaggccgagttcgtggcggcgctgccggacgggttc
gtcgtgcaggcggccggcgcggagcgcgtggcggacgcgcgtgcggcggcggccgatatg
gacgcggccgcgcgcgggacggccggcgccgcggctgcggccgcacgagcgaccgcggcc
gcagccgcacgaatgaccacggccgcagccgcggcgaggggggccgcgccggcgccgcac
gcgggccggcgtggcggcgggcgcgcatcgaatcggaccgtcgacgatgcgcagggatcg
ttgttcgcgttcgacgacgacgcattcggtgtgggcacgtcgggcggcgagccgggggcc
ggcgcgcaaggtgccgggaggcgagatggcggggcgccgagcctcgacgggccgcacgcc
gggcatcgggacggcggcgcatcgcccggcgtcgcgcacagccggcgcgatgcgttcgac
gcgcgtgcccggtcgggtccggcggatgtttccgacctggaaaacgccgcgcgcgcgtac
gcgccggcgggcgcagccggcccggccgattcgccggcggacgcgtctttcgtcgagccg
gccgcctggatcgaagcggacgaactcgcgtggctcgacaacgcggtcttttcgttctcc
gaaggcgcttcggcgaatgccgaagccgacgggcggcgaagcgccgcggcgacggcgacc
gacgcggacgcgcgcaccgcgccgccggttgcgcgggaagcgacggcgccgacgccgcgc
gagaccgcgcgatcggacggttccgccgtcgcgccgctgaccgactgcgtcgtctggctt
gaacgcaactatcgcttcggccttgattcgccgatcggccggctgtcgcttgcgattcgc
cgcggcgcggtgcaggacgcgctcgacgcgctatcgacgcaagacgacgcggccgcgcgt
tttagcgacgacggcggtgcgacgctgtcggccgcgacggtcgagcagctcgcgcgaggc
ttcgccggctatgcggccgcgctgcgcgacgcgctggcgacgcccgaacccgatgcgctg
ccgctcttcgacgtgctcaaccgctttcgcgtgctttgcgcgacgcgcacgggcgcgcgc
ggcgcggaggaagtcaacgcgcgcatggcggccgaggtgcgccgcgcggtgcgcgtgccg
ctcgcgctcggtgcgcactggttcgccggacggcccgtgatggtgacgcgcaacgattac
gcgctcggcctcttcaacggcgacatcggcattgcgctgcccggcgcgcgcggtgcgctg
cgcgtctggtttcgcggcgcggacggccgcgcccgggcggtgtcgcccgccgcgctgccg
ccgcacgacacggcgttcgcgctgaccgtccacaaatcgcagggctcggaattcgacgac
gcggcactgatcctgcccgcgtcgttcaatcgcgtgctgtcgcgcgaactcgtctacacc
gcgatcacgcgcgcgcgcgcgcgcgtgcaggtgatcggctcgcgcgcggtgctcgcgctc
gcgatcgcgacgcgcacggcgcgcgattccggccttgccgcacgaatcgccgatgcgctg
cgcgcgcggcaggagggcgcgcgatga
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