Burkholderia pseudomallei BPC006: BPC006_I1809
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Entry
BPC006_I1809 CDS
T02301
Name
(GenBank) RNA pseudouridine synthase family protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
bpq
Burkholderia pseudomallei BPC006
Brite
KEGG Orthology (KO) [BR:
bpq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bpq03009
]
BPC006_I1809
Enzymes [BR:
bpq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
BPC006_I1809
Ribosome biogenesis [BR:
bpq03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BPC006_I1809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AFR15683
LinkDB
All DBs
Position
I:1748752..1750416
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AA seq
554 aa
AA seq
DB search
MTDIHDIDSSESAHAVATARADDAPEQSAADAGGEDRPRRGLRRGPRSLIARRRAAAKSK
HSDAPESADAAPAADAGAGADVAKAPARAPRGKDAAAKPPRKTAGKREGAARQGAQPKRG
AQQAAAAVAPSAESGQDDVFAYVISPAFDADNNAPGGGVRAPMLRRGRQTQPKRVLSPDD
DAPKLHKVLAEAGMGSRREMEELIIAGRVSVNGEPAHIGQRIMPTDQVRINGKPVKRKLP
SKPPRVLLYHKPTGEIVSHADPEGRPSVFDRLPPMKTAKWLAVGRLDFNTEGLLMLTTSG
DLANRFMHPRYSVEREYAVRVVGELSEASRQRLLHGVELDDGPANFLRIRDGGGEGTNHW
YHVALAEGRNREVRRMFEAVGLMVSRLIRTRHGPIPLPRGLKRGRWEELDEAQVRRLMST
VGLKAPTEDKGGKRGGPAERRQPDPMQTSMGFINREPVLTTHGQLDQPRRGRRGPAGGGF
GAGLGGGYAGLPGYGGASRQGGRDVDGNRASYGGAGANKRGAGKGGRNPNGNRAEGGARG
GPRTPQQRNRSRSR
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
ttgactgatatccacgacatcgattcgtccgaatccgcgcatgccgttgcgacggcgcgc
gccgacgacgcacccgagcagtccgcagcggacgcgggcggcgaagaccgcccgcgccgc
ggtttgcggcgcgggccgcgcagcctgatcgcgcgccgccgagcggccgcgaaatcgaag
cattccgatgcgcccgaaagcgccgacgcggcgccggcggccgatgccggcgcgggcgcc
gacgtcgcgaaagcgcccgctcgcgcgccgcgcggcaaggacgccgcagcgaagccgccg
cgcaagacggcgggcaagcgcgaaggcgcggcgcggcagggcgctcagccgaagcgaggc
gcgcagcaggctgccgcggcggttgcgccgtccgcggagtctggccaggacgacgtgttc
gcctacgtgatttcgccggcgttcgacgccgacaacaacgcgccgggcggcggcgtgcgc
gcgccgatgctgcgccggggccgccagactcagccgaagcgcgtgctgtcgccggacgac
gacgcgccgaagctgcacaaggtgctcgcggaagccggcatgggctcgcgccgcgagatg
gaagagctcatcattgccggccgggtgtcggtgaacggcgagccggcgcacatcggccaa
cggatcatgccgaccgatcaggtgcggatcaacggcaagccggtcaagcgcaagctgccg
agcaagccgccgcgcgtgctgctgtatcacaagccgacgggcgagatcgtgagccacgcg
gatccggagggccgcccgtccgtgttcgatcggctgccgccgatgaagaccgcgaaatgg
ctcgcggtcggccgcctcgacttcaacaccgaaggcctgctgatgctgacgacgtcgggc
gatctcgcgaaccgcttcatgcatccgcgctatagcgtcgagcgcgagtacgcggtgcgc
gtcgtcggcgagctgtccgaggcgtcgcgtcagaggctgctgcacggcgtcgagctcgac
gacggcccggcgaatttcctgcgcattcgcgacggcggcggcgaaggcacgaatcactgg
tatcacgtcgcgcttgccgaagggcgcaaccgcgaggtgcggcggatgttcgaggcggtc
ggcctgatggtgagccgcctgatccgcacgcgccacggcccgatcccgctgccgcgcggg
ttgaagcgcggccgctgggaggaactcgacgaggcgcaggtgcggcgcctgatgtcgacg
gtcggcctgaaggcgccgaccgaggataagggcggcaagcgcggcggcccggccgagcgc
cgccagcccgatccgatgcagacgtcgatgggcttcatcaatcgcgagcccgtgctgacg
actcacggccagctcgaccagccgcggcgcggccgccgcgggccggcgggcggcggcttc
ggcgcgggcctcggcggcggctacgccggcctgccgggctacggcggcgcgtcgcgccag
ggcggccgcgatgtcgacggcaaccgcgcgtcctacggcggcgcgggtgcgaacaagcgc
ggcgccggcaagggcggccgcaatccgaacggcaatcgcgccgaaggcggggcgcgcggc
ggcccgcgtacgccgcagcagcgcaatcgttcgcgtagccgctga
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