Burkholderia pseudomallei BPC006: BPC006_I2878
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Entry
BPC006_I2878 CDS
T02301
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
bpq
Burkholderia pseudomallei BPC006
Pathway
bpq03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bpq00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
BPC006_I2878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpq03019
]
BPC006_I2878
03009 Ribosome biogenesis [BR:
bpq03009
]
BPC006_I2878
03036 Chromosome and associated proteins [BR:
bpq03036
]
BPC006_I2878
Enzymes [BR:
bpq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
BPC006_I2878
Messenger RNA biogenesis [BR:
bpq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BPC006_I2878
Ribosome biogenesis [BR:
bpq03009
]
Eukaryotic type
90S particles
RNase
BPC006_I2878
Prokaryotic type
rRNA processing factors
BPC006_I2878
Chromosome and associated proteins [BR:
bpq03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
BPC006_I2878
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
AFR16733
LinkDB
All DBs
Position
I:complement(2823148..2824536)
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AA seq
462 aa
AA seq
DB search
MESRLRYEFRNAELLRQALTHRSHSATHNERLEFLGDSVLNCAVAALLFQRFGKLDEGDL
SRVRANLVKQQSLYEIAQALNISDGLRLGEGELRSGGFRRPSILADAFEAIIGAVFLDGG
FEAAQGVIKRLYVPILDHIDPRTLGKDAKTLLQEYLQGHKIALPTYTVVATHGAAHNQQF
EVECTVPKLDIKVSGSGASRRAAEQAAAKKALDEVTAVAPMLAAKPKRSKSARGAKHVEP
EIVPGVKGVQEALDLRSPERKERGANRVAGGEAKGVESKAVDAKHGESRAAQLRADDAKA
GETKAGEARASADAKAGAHTHAAAMPAVPEQADDAARSPATTPVAVIRAAHVEHGLDKGE
PRASKPAEKTAAATDKPPEKASDKPSPEKTSEKTPDKSHEKQLDKSSEPVAEKALDKTAD
KPDAAARLPAETADRPPRARDASSSAEPDLAAAPVRVADAGH
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
ttggaaagccggctgcgctatgaatttcgcaatgcggaattattgcgccaggctttgacc
catcgcagtcacagtgccacgcataacgaacggctcgagtttctcggcgattccgttctg
aattgcgcggtggccgcccttttgtttcagcgcttcggcaagctggacgaaggcgatttg
tcgcgcgtacgggcgaacctcgtcaagcagcagtcgctgtacgaaattgctcaggccctc
aatatctcggacggcttgcggctcggcgaaggcgaattgcgcagcggcggattccgaaga
ccgtcgatcctcgcggacgcattcgaagccatcatcggggcggtgttcctcgatggcggc
ttcgaagccgcccaaggggtgatcaagcggctgtacgtgccgattctcgaccatatcgat
ccgcgcacgctcggcaaggacgcgaaaacgctgctgcaggagtatctgcaaggccacaag
atcgcgctgccgacctacaccgtcgtcgcgacgcatggtgcggcgcacaatcaacagttc
gaagtcgaatgcacggtgccgaagctggacatcaaggtgtccggctcgggcgcgagccgc
cgcgcggccgagcaggccgcggcgaagaaggcgctcgacgaggtgacggcggtggcgccg
atgctcgcggcgaagccgaagcgctcgaagagcgcgcgtggcgccaagcatgtggagccg
gagatcgtgccgggcgtgaagggtgtgcaggaggcgctcgatctgcgctcgcccgagcgc
aaggagcgcggcgcgaaccgtgtggcgggcggcgaggcgaagggcgtcgaatcgaaggcg
gtcgacgcgaagcacggggaatcgagggccgcgcagttgcgcgcggacgacgcgaaggca
ggcgagacgaaggcgggcgaggcaagggcttcggcggacgcgaaagccggcgcgcacacc
cacgcggccgctatgcccgccgtgcccgagcaagccgatgatgccgcccggtcgcccgcg
acgacgcccgttgcggtgatccgcgcggcgcacgtcgagcacggcctcgacaagggcgag
ccgcgcgcgtcgaagccggcggaaaaaaccgctgcggcgacggacaagccgccggagaag
gcgagcgacaagccgtcgccggaaaaaacgtcggaaaaaacgccggacaagagtcacgag
aagcagctggacaagtcttccgagccggtggcggaaaaggcgctcgacaagacggcggac
aagccggatgccgccgcgcgtctccctgccgaaacggccgaccggccgccgcgcgctcgc
gacgcgtcgtcgtccgccgagccggatctggccgccgcgcccgtgcgcgtcgccgatgca
ggtcattga
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