Burkholderia pseudomallei BPC006: BPC006_I3000
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Entry
BPC006_I3000 CDS
T02301
Name
(GenBank) formate dehydrogenase, alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
bpq
Burkholderia pseudomallei BPC006
Pathway
bpq00630
Glyoxylate and dicarboxylate metabolism
bpq00680
Methane metabolism
bpq01100
Metabolic pathways
bpq01120
Microbial metabolism in diverse environments
bpq01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
bpq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BPC006_I3000
09102 Energy metabolism
00680 Methane metabolism
BPC006_I3000
Enzymes [BR:
bpq01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
BPC006_I3000
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4
Fer4_7
Fer4_6
Fer4_10
Fer4_21
Fer4_Nqo3
Fer4_9
Fer4_NDSU1
Fer4_2
Fer4_15
Fer4_4
Fer4_16
Motif
Other DBs
NCBI-ProteinID:
AFR16853
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All DBs
Position
I:2934478..2937432
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AA seq
984 aa
AA seq
DB search
MTSSAFDSSRQGCGSGQCACRRAAQTRRADPFDDTDYGTPTRHADTDVTLDIDGRAVTVP
AGTSVMRAAIEAGINVPKLCATDSLEPFGSCRLCLVEIEGRRGYPASCTTPVEAGMKVRT
QSDRLQALRRNVMELYISDHPLDCLTCAANGDCELQDMAGAVGLREVRYGFDGKNHLSDA
KDESNPYFSYDPSKCIVCNRCVRACEETQGTFALTIASRGFESRVAASACEAFMDSECVS
CGACVAACPTATLIEKSVARLGQPEHEIVTTCAYCGVGCALKAEMKGEQVVRMTPHKNGL
ANEGHACVKGRFAWGYATHKDRITKPMIREKITDAWREVSWDEAIGYAAARFRRIQDEHG
RDSIGGITSSRCTNEETYLVQKLVRAAFGNNNVDTCARVCHSPTGYGLKTTLGESAGTQT
FASVGSADVIVVIGANPTDGHPVFGSRLKRRVREGAQLIVVDPRRIDLVDGPHVKAVHHL
QLRPGTNVALVNALAYVIVTEGLVDEAFVAERCEPHAFDVWRAFAARPENSPEATADITG
VPADAVRAAARLYATGGRAAIFYGLGVTEHAQGSTMVMGIANLAMATGNLGIEGAGVNPL
RGQNNVQGSCDMGSFPHELPGYRHIGDAAVRARFDEAWSTTLQPEPGLRIPNMFDAALDG
SFKGLYCQGEDIVQSDPNTQHVAAALASLDCLVVQDIFLNETAKYAHVFLPGATFLEKDG
TFTNAERRISRVRRAMRPLSGYADWEVTLMLSRALGYDMHYAHPSEIMDEIARLTPTFAG
VSYALLDELGSVQWPCNDAAPQGTPTMHVDQFVRGKGKFVITQYIASPEKVTPRYPLILT
TGRILSQYNVGAQTRRTENVRWHGEDRLEIHPHDANDRGIRTGDWVGVASRAGQTVLRAL
VTERMQPGVVYTTFHFPESGANVITTDSSDWATNCPEYKVTAVQVAPVAQPSEWQRAYTR
FRAEQLALLEQRTAERAPAIATGK
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgacctcttccgcattcgattcgtcccggcaaggctgcggctccggccagtgcgcgtgc
cggcgcgccgcgcagacgcggcgcgccgatccgttcgacgacaccgactacggcaccccg
acgcgccacgcggacaccgacgtcacgctcgatatcgacggccgcgcggtcaccgtgccg
gcgggcacgtcggtgatgcgcgcggcgatcgaagccggcatcaacgtgccgaagctctgc
gcgaccgattcgctcgagccgttcggctcgtgtcgcctgtgcctcgtcgagatcgaaggc
cggcgcggctatccggcctcgtgcacgacgcccgtcgaggccggcatgaaggtgcgcacg
caaagcgaccggctgcaggcgctgcgccgcaacgtgatggagctctacatctccgatcat
ccgctcgactgtctcacgtgcgcggcgaacggcgattgcgagctgcaggacatggcgggc
gcggtcggcctgcgcgaggtgcgctacggcttcgacggcaagaaccatctgagcgacgcg
aaggacgaatcgaacccgtacttcagctacgatccgtcgaaatgcatcgtttgcaatcgc
tgcgtgcgcgcgtgcgaggagacgcagggcacgttcgcgctgacgatcgcctcgcgcggc
ttcgaatcgcgggtcgcggcgagcgcgtgcgaggcgttcatggattcggaatgcgtatcg
tgcggcgcatgcgtcgccgcgtgcccgaccgcgacgctcatcgagaaaagcgtcgcgcgg
ctcggtcagcccgagcacgagatcgtgacgacctgcgcgtactgcggcgtcggctgcgcg
ctgaaggcggaaatgaagggcgagcaggtcgtgcggatgacgccgcacaagaacggcctc
gcgaacgaaggccacgcgtgcgtgaaaggccgcttcgcgtggggctatgcgacgcacaag
gaccgcatcacgaagccgatgatccgcgagaagatcaccgacgcgtggcgcgaagtgagc
tgggacgaagcaatcggctacgcggccgcgcgctttcgccgcatccaggacgagcacggc
cgcgattcgatcggcggcatcacgtcgtcgcgctgcacgaacgaagagacgtatctcgtg
cagaagctcgtgcgcgcggcgttcggcaacaacaatgtcgacacttgcgcgcgcgtgtgc
cattcgccgacgggctacggcctgaaaaccacgctcggcgaatcggccggcacgcagacg
ttcgcgtcggtcggctcggccgacgtgatcgtcgtgatcggcgcgaatccgaccgacggc
catccggtgttcggctcgcgcctgaagcgccgcgtgcgcgagggcgcgcagctgatcgtc
gtcgatccgcgccggatcgatctcgtcgacggcccgcacgtgaaggccgtccatcatctg
caactgcgccccggcacgaacgtcgcgctcgtcaacgcgctcgcgtacgtgatcgtcacc
gagggcctcgtcgacgaagcgttcgtcgccgagcgctgcgagccgcatgcgttcgacgta
tggcgcgcgttcgccgcgcggcccgagaattcgcccgaggcgacggcggacatcacgggc
gtgccggccgacgcggtgcgcgccgccgcgcgcctgtacgcgacgggcgggcgcgcggcg
attttctacgggctcggcgtgaccgagcacgcgcagggctcgacgatggtgatgggcatc
gcgaacctcgcaatggcgacggggaatctcggcatcgaaggcgcgggcgtgaacccgctg
cgcgggcagaacaacgtgcagggctcgtgcgacatgggttcgttcccgcacgagctgccc
ggctaccggcacatcggcgacgccgcggtgcgcgcgcgcttcgacgaagcgtggtcgacg
acgctgcagcccgagcccggcctgcgcattccgaacatgttcgacgcggcgctcgacggc
agtttcaaggggctctattgccagggcgaggacatcgtccagtccgatccgaacacgcag
cacgtcgcggccgcgctggcgtcgctcgactgcctcgtcgtgcaggacatcttcctgaac
gaaaccgcgaagtacgcgcacgtattcctgccgggcgcgaccttcctcgagaaggacggc
acgttcacgaacgcggagcgccggatctcgcgcgtgcgccgcgcgatgcggccgctttcc
ggctacgcggactgggaagtgacgctgatgctgtcgcgcgcgctcggctacgacatgcat
tacgcgcatccgtccgagatcatggacgagatcgcgcgcctcacgccgacgttcgcgggc
gtgtcgtacgcgctgctcgacgagctgggcagcgtccagtggccgtgcaacgacgcggcg
ccgcaaggcacgccgacgatgcacgtcgatcagttcgtgcgcggcaagggcaagttcgtc
atcacgcagtacatcgcgtcgccggagaaggtgacgccgcgctatccgctcatcctgacg
acgggccgcattctgtcgcagtacaacgtcggcgcgcagacgcgccgcacggagaacgtc
cgctggcacggcgaggatcggctcgagatccatccgcacgacgcgaacgatcgcggcatc
cggacaggcgactgggtcggcgtcgcatcgcgcgccgggcagacggtgctgcgcgcgctc
gtcaccgagcggatgcagccgggcgtcgtctacacgacgttccacttcccggaatcgggc
gcgaacgtgatcacgaccgacagctcggactgggcgaccaactgccccgagtacaaggtg
acggccgtgcaggtcgcgcccgtcgcgcagccgtccgaatggcagcgcgcgtacacgcgc
tttcgcgcggagcagctcgcgctgctcgagcagcgcacggccgagcgcgcgccggccatc
gccacgggcaagtga
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