Burkholderia pseudomallei BPC006: BPC006_I3545
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Entry
BPC006_I3545 CDS
T02301
Name
(GenBank) ribonuclease II (RNB)-like protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
bpq
Burkholderia pseudomallei BPC006
Brite
KEGG Orthology (KO) [BR:
bpq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpq03016
]
BPC006_I3545
Enzymes [BR:
bpq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
BPC006_I3545
Transfer RNA biogenesis [BR:
bpq03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BPC006_I3545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
AFR17390
LinkDB
All DBs
Position
I:complement(3428796..3430874)
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AA seq
692 aa
AA seq
DB search
MNVFFEESGSFKAGSVLSRQGDAFQVELPGGRRAKVRAKDVLIEFEKPAAGELMQQADEA
AQQIDLDFLWECAPAEEFAYAALADEYFGASYGPVERAALVLRLHGAPVYFRRKGRGQYQ
RAPEEQLKMALAGLERKRQQALVQAGYEEELKAGRLPDAFAGKALGLLTKPDKNSIEYKA
LDAAALARGVSPARLMLDCGGIPSARALHEARFLAEYFPHGTGFPAVAVGKLPEDLPRAD
VNAFSIDDITTTEIDDAFSVEHLSDGRVRIGVHIAAPALGIVRGDAVDAIARARLSTVYM
PGDKITMLPDDVVDVFTLKEGDYRPALSLYIIVKRDTQEIVANETRAEYVYVKSNLRHNT
LDELVTEDALAAGTGDYPHKDDIAALWPLAQALFERRQVARAGYGLKREVQRNTDYNFYV
EGEHVSITPRRRGSPLDLIVSELAILANSTWGAFLHDHSVPGIYRTQRAFGMPSGPKRTR
MQTSAAPHEGLGVPQYAWSTSPLRRYVDLVNQWQLLACVQHGVTAKLAAPFKQKDADLYA
VVQGFDDTYAAYADHQRRMEYFWCLRWIKQEGRKQVSATVVKGELVRLDEVPLLLHVPAL
GVHARGTRVLLDVMSVDELTIEASVRLVSVLDAPMVSSGEPADEDEDADAADETLLDAAD
ESAQGEAEALAEAGGAASGNGESSANGEEQSK
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgttttcttcgaggaatcgggcagtttcaaggcgggcagcgtgctgtcgcgccag
ggcgacgcgtttcaggtcgaattgccgggcggccggcgcgcgaaggtgcgcgcgaaggac
gtgctgatcgaattcgagaagcccgcggcgggcgagctgatgcagcaggcggacgaagcc
gcccaacagatcgatctggatttcctgtgggagtgcgcgcccgccgaggaattcgcgtat
gccgcgctcgccgacgaatatttcggcgcgagctacggccccgtcgagcgcgcggcgctc
gtgctgcgcctgcacggcgcgcccgtctacttccgccgcaaggggcgcggccagtatcag
cgcgcgcccgaggagcagctgaaaatggcgctggccgggctcgagcgcaagcgccagcag
gcgctcgtgcaagccggctacgaggaggagctgaaggcgggcaggctgcccgacgcgttc
gcgggcaaggcgctcggcctgctgacgaagccggacaagaactcgatcgaatacaaggcg
ctcgatgcggcggcgctcgcgcgcggcgtgtcgccggcgcgcctgatgctcgactgcggc
ggcattccgtcggcgcgcgcgctgcacgaggcgcgctttctcgccgaatacttcccgcac
ggcacgggctttccggccgtcgcggtcggcaagctgcccgaggatctgccgcgcgcggac
gtcaacgcgttctcgatcgacgacatcacgacgaccgaaatcgacgacgcgttctccgtc
gagcacctgtccgacgggcgcgtgcggatcggcgtgcacatcgcggcgcccgcgctcggc
atcgtgcgcggcgatgcggtcgacgcgatcgcgcgcgcgcggctgtcgaccgtctacatg
ccgggcgacaagatcacgatgctgccggacgacgtcgtcgacgtgttcacgctgaaggag
ggcgattaccgcccggcgctgtcgctgtacatcatcgtcaagcgcgacacgcaggaaatc
gtcgcgaacgagacgcgcgccgaatacgtctatgtgaagagcaacctgcggcacaacacg
ctcgacgagctcgtcaccgaggacgcactcgcggcgggcacgggcgattatccgcacaag
gacgacatcgcggcgctctggccgctcgcgcaggcgctcttcgagcgacgccaggtcgcg
cgcgcgggctacgggctcaagcgcgaagtgcagcgcaacaccgattacaacttctacgtc
gaaggcgagcacgtgtcgatcacgccgcgccggcgcggctcgccgctcgatctcatcgtg
tccgagctcgcgatcctcgcgaactcgacatggggcgcgttcctgcacgatcacagcgtg
ccgggcatttaccgcacgcagcgcgcgttcggcatgccgagcgggccgaagcgcacgcgc
atgcagacgagcgccgcgccgcacgaggggctcggcgtgccgcagtacgcgtggagcacg
tcgccgctgcgccgctacgtcgacctcgtcaaccagtggcaactgctcgcgtgcgtgcag
cacggcgtcaccgcgaagctcgccgccccgttcaagcagaaggatgcggatctgtacgcg
gtcgtgcagggtttcgacgacacgtacgccgcgtacgccgaccaccagcgccggatggag
tatttctggtgcctgcgctggatcaagcaggaaggccgcaagcaggtgagcgcgaccgtc
gtgaagggcgagctcgtgcgcctcgacgaagtgccgctgctgctgcacgtgcccgcgctc
ggcgtgcatgcgcgcggcacgcgggtgctgctcgacgtgatgtcggtcgacgagctgacg
atcgaggcgtcggtacggctcgtgagcgtgctcgatgcgccgatggtgtcgagcggcgag
ccggccgacgaagacgaggacgccgacgcggccgacgagacgctgctcgacgccgccgac
gaatcggcgcaaggcgaagcggaagcgctcgccgaggcgggcggcgcggcgagcggcaac
ggcgaatcgtccgcgaacggcgaggaacaatcgaaatga
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