Burkholderia pseudomallei BPC006: BPC006_I3795
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Entry
BPC006_I3795 CDS
T02301
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bpq
Burkholderia pseudomallei BPC006
Brite
KEGG Orthology (KO) [BR:
bpq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpq03016
]
BPC006_I3795
Enzymes [BR:
bpq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
BPC006_I3795
Transfer RNA biogenesis [BR:
bpq03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
BPC006_I3795
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
2H-SAK
Acb1
Motif
Other DBs
NCBI-ProteinID:
AFR17628
LinkDB
All DBs
Position
I:complement(3680275..3680835)
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AA seq
186 aa
AA seq
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MTMAGDRLRCFVALTLDRASRDALAALPVAAGARRTPRDQLHVTIAFLGAIERAKSELLG
ARIPALAAAGAVPPVDVERVVCWPSTAHARLVVAELAPQPSLLALGERVGGALRALGLPP
DSRAFKPHVTIARFPRDAHRVTIDGACGAERRSPFALRFETLTLYESVLTRMGAEHRVLA
AAALPA
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgacgatggcgggcgaccggttgcgctgcttcgtcgcgctgacgctcgatcgggcgtcg
cgcgacgcgctggccgcgctgcccgtcgccgccggcgcgcggcgcacgccgcgcgaccaa
ctgcacgtgacgatcgcgttcctcggcgcgatcgagcgcgcgaagagcgaactgctcggc
gcgcgcatccccgcgctcgcggcggccggcgcggtgccgcccgtcgacgtcgagcgcgtc
gtctgctggccgagcaccgcgcatgcgcggctcgtcgtcgcggagctcgcgccgcagccg
tcgttgctcgcgctcggcgagcgggtgggcggcgcgctgcgcgcgctcggcctgccgccc
gacagccgtgcgttcaagccgcacgtgacgatcgcgcggtttcctcgcgacgcgcatcgc
gtgacgattgacggcgcgtgcggcgccgagcgccgctcgccgttcgcgttgcggttcgaa
acgctcacgctctacgagagcgtcctcacgcgcatgggcgccgagcatcgggtgctcgcg
gcagcggcgctgccggcataa
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