Burkholderia pseudomallei BPC006: BPC006_II0193
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Entry
BPC006_II0193 CDS
T02301
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
bpq
Burkholderia pseudomallei BPC006
Brite
KEGG Orthology (KO) [BR:
bpq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bpq03009
]
BPC006_II0193
Enzymes [BR:
bpq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BPC006_II0193
Ribosome biogenesis [BR:
bpq03009
]
Prokaryotic type
rRNA helicases
BPC006_II0193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
Cas3-like_C_2
P-loop_SecA
YjeF_N
WSD
Motif
Other DBs
NCBI-ProteinID:
AFR18132
LinkDB
All DBs
Position
II:complement(188838..190235)
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AA seq
465 aa
AA seq
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MTYPPTATPFSALALTPATLANLAQLGYTDMTPIQAASLPIALAGHDLIAQAKTGSGKTA
AFSLALLARLDARRFDVQALVLCPTRELADQVAQEIRRLARAEENVKVLTLCGGTPMRPQ
TQSLEHGAHIIVGTPGRIMDHLDRGHLTLDALNTLVLDEADRMLDMGFFDDIAKVARQCP
PTRQTLLFSATYPDGIAKLSQQFLRHPKRVKLEERHDDSKIRQRFYEVTEDERLHAVGLL
LNHYRPVSTIAFCNTKQQCRDLLDVLHAQGFHALALHGELEQRERDQVLIRFANRSCSVL
VATDVAARGLDIAQLEAVINVDVTPDPEVYVHRIGRTGRADQDGWALSLASMNEMGRVGG
IEQALAREVEWHPLAELKAGGDAPLLPPMETLQILGGRKDKIRPGDVLGALTGDAGFSGA
QIGKINVTEFSTYVAVERGIARDALRKLNAGKIKGKRVKVRLMDE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgacctacccccccaccgccacgccgttcagcgcgctggcgctgacgcccgcgacgctc
gcgaatctcgcgcagctcggctacaccgacatgacgccgatccaggccgcgagcctgccg
atcgcgctcgccggccacgacctgatcgcgcaggcgaaaaccggcagcggcaagacggcc
gcgttctcgctcgcgctgctcgcacgcctcgacgcgcgccgcttcgacgtgcaggcgctg
gtgctgtgcccgacgcgcgaactggccgaccaggtcgcgcaggaaatccgccgcctcgcg
cgcgcggaggagaacgtcaaggtgctgacgctgtgcggcggcacgccgatgcgccctcaa
acgcagagcctcgaacacggcgcgcacatcatcgtcggcacgccggggcgcatcatggat
catctggaccgcggccatctgacgctcgacgcgctgaacacgctcgtgctcgacgaagcg
gaccggatgctcgacatgggtttcttcgacgacatcgcgaaggtggcgcggcaatgcccg
ccgacgcgccagacgctgctgttctccgccacgtatccggacgggatcgcgaagctcagc
cagcagttcctgcgccatccgaagagggtgaagctcgaggaacgccacgacgacagcaag
atccgccagcgcttctacgaagtgaccgaggacgagcggctgcatgcggtcggcctgttg
ctgaaccactatcgcccggtgagcacgatcgcgttctgcaacacgaagcagcaatgccgc
gatctgctcgacgtgctgcatgcgcagggtttccacgcgctcgcgctgcacggcgagctc
gagcagcgcgagcgcgaccaggtgctgatccggttcgcgaaccgcagttgctcggtgctc
gtcgcgaccgacgtcgccgcgcgcggcctcgacatcgcgcagctcgaggcggtgatcaac
gtcgacgtgacgcccgacccggaagtgtacgtgcaccgcatcggccgcacgggccgcgcc
gaccaggacggctgggcgctgagcctcgcgagcatgaacgagatgggccgcgtgggcggc
atcgagcaggcgctcgcgcgcgaagtcgaatggcatccgctcgccgaattgaaggccggc
ggcgacgcgccgctgctgccgccgatggagacgctgcagattctcggcggccgcaaggac
aagatccgccccggcgacgtgctgggcgcgctgacgggcgacgcgggcttcagcggcgcg
cagatcggcaagatcaacgtgaccgagttctcgacctatgtggcggtggaacgcggcatc
gcgcgcgacgcgctgcgcaagctcaacgcgggcaagatcaagggcaagcgggtgaaggtg
cggctgatggacgaatga
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