Burkholderia pseudomallei BPC006: BPC006_II0311
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Entry
BPC006_II0311 CDS
T02301
Name
(GenBank) squalene/phytoene synthase family protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
bpq
Burkholderia pseudomallei BPC006
Pathway
bpq00100
Steroid biosynthesis
bpq00909
Sesquiterpenoid and triterpenoid biosynthesis
bpq01100
Metabolic pathways
bpq01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
bpq00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
BPC006_II0311
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
BPC006_II0311
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bpq01006
]
BPC006_II0311
Enzymes [BR:
bpq01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
BPC006_II0311
Prenyltransferases [BR:
bpq01006
]
Terpene biosynthesis
Squalene/phytoene synthase
BPC006_II0311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
T4SS
Motif
Other DBs
NCBI-ProteinID:
AFR18249
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Position
II:314056..315057
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AA seq
333 aa
AA seq
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MSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQINGAPD
PHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSASDRAAVRGVVTTLTEGMEFDL
RTFPDESSGRIVALREWPALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMSERGIR
FGKALQMTNVLRDCGRDLRIGRCYLPQAMLDEYGLRAEDLLGPGASLRARPLMHALVRTT
LAHFHAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASNDAWLDPARASKVRRGDVY
RILAYSLPLAMSNGALRAWLDRLIADVEARLIA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgcgctccttctatctgacgttgcgcgtgctgccgcaaggcatgcgcgacccgatc
ggccttgcgtatctgctcgcgcgcgcggccgacacgatcgccgacacgtcgctgatcccg
cccgctcagcggctcgaactgctgctgtcgctgcgcgcgcagatcaacggcgcgcccgat
ccgcacgcgctcgcgcggatcgcgggcgaggtcgcggggcagcaggcgcagacggacgag
aagacgctgctcgaatcgctcggccccgcgctcgcggtgctgtcgcaattgagcgcgtcc
gatcgcgccgcggtgcgcggcgtcgtcaccacgctcaccgaagggatggaattcgatttg
cgcacgttcccggacgaatcgtcgggccgcatcgtcgcgctgcgggaatggccggcgctc
gatcgctatacgtatctcgttgccggctgcgtcggcgaattctggacgaagatgacgtgc
gcgcatctgcccgggctgctgaccgagcgggaggacacgatgagcgagcgcggcatccgc
ttcggcaaggcgctgcagatgaccaacgtgctgcgcgactgcggcagggacctgcggatc
ggccgctgctatctgccgcaggcgatgctggacgaatacgggctgcgcgcggaggatctg
ctggggccgggcgcttcgctgcgcgcacggccgctgatgcatgcgctcgtgcgcacgacg
ctcgcgcattttcacgcgggcatcgattatacgttcgcgattccgcgccgcgcgccgcgc
ctgcggcttgcctgtttctggccgatcgcgatcggcctgcggacgctcgcgctgctcgcg
tcgaacgacgcgtggctcgatccggcgcgcgcgtcgaaggtgcggcgcggcgacgtctac
cggatcctcgcgtattcgctgccgctcgcgatgtcgaacggcgcgctgcgcgcgtggctc
gaccgcctgatcgcggacgtcgaggcgcggctcatcgcgtga
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