Burkholderia pseudomallei BPC006: BPC006_II0483
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Entry
BPC006_II0483 CDS
T02301
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
bpq
Burkholderia pseudomallei BPC006
Pathway
bpq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bpq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BPC006_II0483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpq03400
]
BPC006_II0483
DNA repair and recombination proteins [BR:
bpq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BPC006_II0483
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BPC006_II0483
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
UB2H
TraI-like_C
AAA_16
FlaG
Motif
Other DBs
NCBI-ProteinID:
AFR18416
LinkDB
All DBs
Position
II:495616..497706
Genome browser
AA seq
696 aa
AA seq
DB search
MSEHHSDTRDDLDESKFVTFEGSPFQLYQPYPPSGDQPTAIATLVEGVEDGLSFQTLLGV
TGSGKTYTMANTIARLGRPAIVFAPNKTLAAQLYAEFREFFPRNAVEYFVSYYDYYQPEA
YVPQRDLFIEKDSSINEHIEQMRLSATKSLMERRDVVIVATVSAIYGIGNPSEYHQMILT
LRTGDKIGQREVIARLIAMQYTRNEQDFQRGTFRVRGDTIDIFPAEHAEMAVRVELFDDE
VDTLHLFDPLTGRVRQKIPRFTVYPSSHYVTPRETVMRAVETIKDELRERLEFFHRDGKL
VEAQRLEQRTRFDLEMLQELGFCKGIENYSRHFSGAAPGEPPPTLVDYLPPDALMLLDES
HVLIGQLNGMYNGDRARKENLVDYGFRLPSALDNRPLKFPEFERKMRQVVFVSATPADYE
QRVSGQTAEQVVRPTGLVDPQIEVRPASTQVDDVLSEITERVKANERVLITVLTKRMAEQ
LTEFLADHGVKVRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAIL
DADKEGFLRAERSLIQTIGRAARNVNGKALLYADRITDSMRRAIDETERRRAKQIAYNEK
MGITPRGVVKRIKDIIDGVYNADEARAELKEAQQRAKFEDMSEKQIAKEIKRLEKQMADY
AKNLEFEKAAQTRDQLALLRERVFGANVGDHVSGGE
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacaccactccgacacccgtgacgatctagacgaatcgaaattcgtgacgttc
gaaggttctccgtttcagctgtatcagccttatccgccgtcgggcgaccagcccaccgcg
atcgcgacgctcgtcgaaggcgtcgaggatggcctgtcgttccagacgctgctcggcgtg
acgggctccggcaagacctacacgatggcgaacacgatcgcgcggctcggccgtccggcg
atcgtgttcgcgccgaacaagacgctcgccgcgcagttgtacgcggagttccgcgagttt
ttcccgcgcaacgcggtcgagtacttcgtgtcgtactacgactactaccagccggaagca
tacgtgccgcagcgcgatctcttcatcgagaaggattcgtcgatcaacgagcacatcgag
cagatgcggctgtcggcgacgaagagcctgatggagcggcgcgatgtcgtgatcgtcgcg
acggtgtcggcgatctacggtatcggcaatccgtccgaataccaccagatgatcctcacg
ctgcgcacgggcgacaagatcggccagcgcgaggtgatcgcgcggctgatcgcgatgcag
tacacgcgcaacgagcaggacttccagcgcggcacgtttcgcgtgcgcggcgacacgatc
gacatcttcccggccgagcatgcggagatggcggtgcgcgtcgagttgttcgacgacgaa
gtcgatacgctgcacctgttcgatccgctgacggggcgcgtgcggcagaagattccgcgc
ttcaccgtctatccgtcgtcgcactacgtgacgccgcgcgagactgtgatgcgcgcggtc
gagacgatcaaggacgaattgcgcgagcgtctcgaattcttccatcgcgacggcaagctc
gtcgaggcgcagcgcctcgagcagcgcacccggttcgacctcgagatgctgcaggagctc
ggcttctgcaagggcatcgagaattattcgcggcacttctccggcgcggcgccgggcgag
ccgccgccgaccctcgtcgactatctgccgcccgacgcgctgatgctgctcgacgaatcg
cacgtgctgatcggccagttgaacggcatgtacaacggcgatcgcgcgcgcaaggaaaac
ctcgtcgattacgggttccggctgccgtcggcgctcgataaccggccgctcaagtttccc
gagttcgagcgcaagatgcgccaggtggtgttcgtgtcggcgacgcccgccgactacgag
cagcgcgtgtccggccagaccgccgagcaggtcgtgcggccgaccgggctcgtcgatccg
cagatcgaggtgcgcccggcgagcacgcaggtggacgacgtgctctccgagatcaccgag
cgggtgaaggcgaacgagcgcgtgctgatcaccgtgctcacgaagcgcatggccgagcaa
ttgaccgaattcctcgccgaccacggggtcaaggtccgctatctgcacagcgacatcgac
accgtcgagcgcgtcgagatcatccgagacctgcggctcggcacgttcgacgtgctggtc
gggatcaacctgctgcgcgagggcctcgacattccggaagtgtcgctcgtcgcgatcctc
gatgcggacaaggagggcttcctgcgcgccgagcgctcgctgatccagacgatcggccgc
gcggcgcgcaacgtgaacggcaaggcgctcctgtacgcggaccggatcaccgattcgatg
cgccgcgcgatcgacgagaccgagcgccgccgcgcaaagcagatcgcatacaacgaaaag
atgggcattacgccgcgcggcgtcgtgaagcggatcaaggacatcatcgatggcgtgtac
aacgccgacgaggcgcgcgccgagctgaaggaggcgcagcagcgcgcgaaattcgaggac
atgtccgagaagcagatcgcgaaggaaatcaagcggctcgaaaagcagatggccgattac
gcgaaaaatctcgagttcgagaaagccgcgcagacgcgcgaccagctcgcgctgctgcgc
gaacgggtgttcggcgcgaatgtcggcgatcacgtgagcgggggcgagtga
DBGET
integrated database retrieval system
