KEGG   Burkholderia pseudomallei BPC006: BPC006_II2014
Entry
BPC006_II2014     CDS       T02301                                 
Name
(GenBank) ATP-dependent Clp protease, ATP-binding subunit ClpB
  KO
K11907  type VI secretion system protein VasG
Organism
bpq  Burkholderia pseudomallei BPC006
Pathway
bpq03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:bpq00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BPC006_II2014
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bpq02044]
    BPC006_II2014
Secretion system [BR:bpq02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   BPC006_II2014
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 Clp_N AAA_22 ClpB_D2-small AAA_16 NBD_SMAX1 Zeta_toxin nSTAND3 AAA_7 ResIII TniB AAA_25 TIP49 AAA_24 Sigma54_activat bpMoxR NACHT Torsin AAA_14 T2SSE nSTAND_NTPase5 AAA_6 DUF3584
Other DBs
NCBI-ProteinID: AFR19940
LinkDB
Position
II:2053196..2056252
AA seq 1018 aa
MLLVDLKPLIEQLNPYCRNALESAVGACVARRHDDVAVEHLLARLCDEPSADVALLLRAC
GADAARLRRQADAALDARPAGDGGRPAFAPSLLALLQDAWLIASLELGDTHIRSAAVLAA
AVARAARQPSPGGDDVLQSLRKDALVARFASGACARSIESRASGALDAAPGEASDTRDAS
SAIARYCEDFTAKARAGGIDPVFGRDAEIRQIVDILARRRKNNPVCVGEPGVGKTAVVEG
LALRIAEGDVPATLRGATLLGLDLGMLQAGASVKGEFEQRLKRVIAEIRASQTPVVLFID
EAHTLIGAGGAAGASDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRFQPVKL
DSPDVATSVMILRGLKERYQDAHGVTIRDDALVAAAELSARYITGRQLPDKAIDLLDTAC
ARVKVRQQTKPAALEDAQRAIQALERERRALRDELAERCAPDTPRVADIDRELAALSARA
GALRDAWAAQRDAAQALVDARRACRAAADATAATDAAGTTGTAHAGELADSADVSDIADV
AKMADAADAAPADAETGSNARDADARMPAGTCARIAPNPDARARPPLRAPHADARERAAH
ALAEATRRFEHAQRDTPLVRIDVDPDAIADVVADWTGIAAGKLRRDRANVMLRLADTLRR
RIRGQDHAIEQISEAVKAGAAGVHDPRRPLGVFLLAGPSGTGKTETALAVADALFGDERS
IVVVNMSEFQERHDVSRLIGSPPGYVGYGEGGMLTEAVRQRPYSVVLLDEVEKAHPDVLN
LFYQVFDKGSLSDGEGKEVDFANTVIFLTSNLGADIIADIAARGARPDPDAMRAAVRPAL
SRHFKPALLARMTEIPYAPLAPDTLADIARLKLERIAARVAAQHATRIVYDDAVVAHVAA
RCTEVESGARNVDFILQRHVLPALAQHVLVCAGNAAPMPAIRVAIDAGGRFVVSNDAPAD
SDARDRSDASDASDASDASDAIDAVDAVDAVDAPNAPNAPNAPNAPNAPNAPNAPNAR
NT seq 3057 nt   +upstreamnt  +downstreamnt
atgctgctggttgacctgaaaccgttgatcgaacagctcaacccctattgccggaacgcg
ctcgaaagcgccgtcggcgcgtgcgtcgcgcgccggcacgacgacgtcgccgtcgagcac
ctgctcgcgcggctgtgcgacgagccgtcggccgacgtcgcgctgttgctgcgcgcgtgc
ggcgcggacgcggcgcgcctgcgccggcaggccgacgccgcgctcgacgcgcgcccggcg
ggcgacggcggccgccccgcgttcgcgccgtcgctgctcgcgctgttgcaggacgcgtgg
ctgatcgcgtcgctcgagctcggcgacacgcacatccgctcggcggccgtgctcgccgcc
gcggtcgcccgcgcggcgcggcagccgtcgcccggcggcgacgacgtgctgcagtcgctg
cgcaaggacgcgctcgtcgcgcgctttgcgagcggcgcgtgcgcgcgatcgatcgaatcg
cgcgcgtccggcgcgctcgacgccgcgccgggcgaggcgagcgacacgcgcgacgcatcg
agcgcgatcgcccgctactgcgaggacttcaccgcgaaagcgcgcgccggcgggatcgat
ccggtcttcggtcgcgacgcggaaatccgccagatcgtcgacatcctcgcgcggcggcgc
aagaacaatccggtgtgcgtcggcgagccgggcgtgggcaagacggccgtcgtcgaaggg
ctcgcgctgcggatcgccgaaggcgacgtgccggcgacgctgcgcggcgcgacgctgctc
ggcctcgacctcggcatgctgcaggcgggcgcgagcgtgaagggcgaattcgagcagcgg
ctcaagcgcgtgatcgccgagatccgcgcgtcgcaaacgcccgtcgtgctgttcatcgac
gaagcgcacacgctgatcggcgcgggcggcgcggcgggcgcgtccgacgcggcgaacctg
ctgaagcccgcgctcgcgcgcggcgagctgcgcacgatcgcagccaccacgtggagcgaa
tacaagaagtatttcgagaaggacgcggcgctcgcgcggcgcttccagccggtgaagctc
gacagcccggacgtcgcgacgtcggtgatgatcctgcgcgggctgaaggagcgctatcag
gacgcgcacggcgtgacgatccgcgacgacgcgctcgtcgccgcggccgagctgtcggcg
cgctacatcaccggccggcagttgccggacaaggcgatcgacctgctcgacaccgcgtgc
gcgcgcgtgaaggtgcgccagcagaccaagcccgccgcgctggaggacgcgcagcgcgcg
atccaggcgctcgagcgcgagcggcgcgcgctgcgcgacgaattggccgagcgctgcgcg
ccggatacgccgcgcgtcgccgacatcgatcgcgagctcgccgcactgtccgcgcgcgcc
ggcgcgctgcgcgacgcgtgggcggcgcagcgcgacgccgcgcaggcgctcgtcgacgca
cgccgcgcgtgccgggcggcggcggatgcaacggctgcaacggatgcggctggaacgacc
ggaacggcccatgccggcgagctcgccgatagtgccgacgtttccgatatcgccgatgtc
gccaagatggccgatgcggccgacgccgcccctgccgatgccgaaaccggctcgaacgcc
cgcgacgccgacgcacgcatgcccgccgggacgtgcgcgcgcatcgccccgaacccggat
gcgcgggcgcggccccctctgcgcgcgccgcacgccgacgcgcgcgagcgcgcggctcat
gcgctcgccgaagcgacgcgccgcttcgagcacgcgcagcgcgacacgccgctcgtgcga
atcgacgtcgatccggacgcgatcgccgacgtcgtggccgactggaccggcatcgcggcc
ggcaagctgcgccgcgatcgcgcgaacgtgatgctgcggctcgccgatacgctgcgccgc
cgcatccgcggccaggatcacgcgatcgaacagatctccgaagccgtgaaggcgggcgcg
gccggcgtccacgatccgcgccgcccgctcggcgtgttcctgctcgcggggccgtcgggc
accggcaagaccgagaccgcgctcgcggtcgccgatgcgctgttcggcgacgagcgctcg
atcgtcgtcgtcaacatgagcgaattccaggagcggcacgacgtgagccgcctgatcggc
tcgccgccgggctacgtcggctacggcgagggcgggatgctgaccgaggcggtgcgccag
cggccctattcggtcgtgctgctagacgaagtcgagaaggcgcaccccgacgtgctgaac
ctgttctaccaggtgttcgacaagggttcgctgtccgacggcgaaggcaaggaggtcgac
ttcgcgaacacggtgatcttcctcacgtcgaatctcggcgcggacatcatcgccgacatc
gccgcgcgcggcgcgcggcccgatccggacgcgatgcgcgcggcggtacgcccggcgctg
tcgcgccatttcaagccggcgctgctcgcgcggatgaccgagattccgtatgcgccgctc
gcgcccgatacgctcgccgacatcgcgcggctgaagctcgagcgcatcgcggcgcgcgtc
gccgcgcagcacgcgacgcgcatcgtctacgacgacgccgtcgtcgcgcacgtcgccgcg
cgctgcaccgaagtcgaatcgggcgcgcgcaacgtcgatttcatcctgcagcgccacgtg
ctgcccgcgctcgcgcagcacgtgctcgtgtgcgcgggcaacgcggcgccgatgcctgcg
attcgcgtcgccatcgacgccggcggccgcttcgtcgtctcgaacgacgcgccggccgac
tccgatgcacgggaccggagcgatgcgtccgatgcgtccgatgcgtctgatgcgtctgat
gcgatcgacgcggtcgacgcggtcgatgcggtcgatgcacccaacgcacccaacgcaccc
aacgcacccaacgcacccaacgcacccaacgcacccaacgcacccaacgcacgctga

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