Burkholderia pseudomallei BPC006: BPC006_II2371
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Entry
BPC006_II2371 CDS
T02301
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bpq
Burkholderia pseudomallei BPC006
Pathway
bpq03030
DNA replication
bpq03410
Base excision repair
bpq03420
Nucleotide excision repair
bpq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BPC006_II2371
03410 Base excision repair
BPC006_II2371
03420 Nucleotide excision repair
BPC006_II2371
03440 Homologous recombination
BPC006_II2371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpq03032
]
BPC006_II2371
03400 DNA repair and recombination proteins [BR:
bpq03400
]
BPC006_II2371
Enzymes [BR:
bpq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BPC006_II2371
DNA replication proteins [BR:
bpq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BPC006_II2371
DNA repair and recombination proteins [BR:
bpq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BPC006_II2371
NER (nucleotide excision repair)
GGR (global genome repair) factors
BPC006_II2371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
AFR20296
LinkDB
All DBs
Position
II:complement(2435443..2438073)
Genome browser
AA seq
876 aa
AA seq
DB search
MLRRMRKDVSAEYSACVFDAKGKTFRDDLYADYKAHRPPMPPDLALQIEPIHTAVRALGW
PLLMIEGVEADDVIGTLAKQAEQHGMNVIVSTGDKDLAQLVTDRVTLINTMTNEALDRDG
VLAKFGVPPERIVDYLSLIGDTVDNVPGVEKCGPKTAVKWLTQYGSLDGVVEHAGEIKGV
VGDNLRRALDFLPLARKLVTVETGCELAPHVESFDASLATDGEGRDALREIFAKYGFKTW
LRELDSEPAAAAGAAAAGAAPDPASGATAELPLATARNYATVQTWEQFDAWLATISAAEL
TAFDTETTSLDPMRAQIVGLSFSVEPGHAAYVPVAHRGPDMPAQLPRDEVLAKLTPWLED
AGKKKLGQHLKYDAQVLANYGIALNGIEHDTLLESYVLESHRTHDMDSLALRHLGVKTIK
YEDVAGKGAQQIGFDEVPLAQASEYAAEDADITLQLHHALYPQIAREPGLTRVYRDIELP
VSLVLRKMERTGVLIDGDRLSRQSGEIATRLVALEQEAYALAGGEFNLGSPKQIGQIFFE
RLQLPVVKKTPSGAPSTDEEVLQKLAEDYPLPKLLLEHRGLSKLKSTYTDKLPRMVNPDT
GRVHTNYAQAVAVTGRLASNDPNLQNIPVRTAEGRRIREAFVAPPGSKIVSADYSQIELR
IMAHISEDESLLRAFAHGEDIHRATAAEVFGVTPLEVTSDQRRIAKVINFGLIYGMSSFG
LASNLGITRDAAKLYIDRYFLRYPGVARYMEETRMRAKEKGYVETVFGRRLWLPEINGGN
GPRRQAAERAAINAPMQGTAADLIKLSMIAVDDWLERGGLRARMIMQVHDELVLEVPEDE
LSIVREKLPEMMCGVAKLKVPLVAEVGVGENWEEAH
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgccgcatgcgcaaggatgtcagtgcagagtatagcgcgtgcgtgttcgacgcc
aagggcaaaaccttccgcgacgatctgtatgccgactacaaggcgcaccgcccgccgatg
ccgcccgatctcgcgctgcagatcgagccgatccatacggccgtgcgcgcgctcggctgg
ccgctgttgatgatcgagggcgtcgaggccgacgacgtgatcggcacgcttgcgaagcag
gccgaacaacacggcatgaacgtgatcgtctcgacgggcgacaaggacctcgcgcagctc
gtcaccgatcgcgtcacgctcatcaacacgatgacgaacgaggcgctcgaccgcgacggc
gtgctcgcgaagttcggcgtgccgccggagcggatcgtcgattacctgtcgctcatcggc
gacaccgtcgacaacgtgccgggcgtcgagaagtgcgggccgaagacggccgtcaagtgg
ctcacgcagtacggctcgctcgacggcgtcgtcgaacatgcgggcgagatcaagggcgtc
gtcggcgacaacctgcgccgtgcgctcgatttcctgccgctcgcgcgcaagctggtgacg
gtcgagaccggctgcgagctcgcgccgcacgtcgaatcgttcgacgcgtcgctcgcgacg
gacggcgagggccgcgacgcgctgcgcgagatcttcgcgaagtacggcttcaagacgtgg
ctgcgcgagctcgacagcgaacccgccgccgcggccggtgcggccgccgccggcgccgcg
ccggatccggcgagcggcgcgacggccgaactgccgctcgccacggcgcgcaactacgcg
accgtgcagacgtgggagcagttcgacgcgtggctcgcgacgatctccgccgcagagctg
accgcgttcgacaccgagacgacgtcgctcgacccgatgcgcgcacaaatcgtcggcctg
tcgttctcggtggagccgggccatgccgcgtacgtgccggttgcgcaccgcgggccggac
atgcccgcgcaactgccgcgcgacgaagtgctcgcgaagctcacgccgtggctcgaggat
gcgggcaagaagaagctcggccagcacctgaagtacgacgcgcaggtgctcgcgaactac
ggcatcgcgctgaacggcatcgagcacgacacgctgctcgaatcgtatgtgctcgaatcg
caccgcacgcacgacatggacagcctcgcgctgcgccatctcggcgtgaagacgatcaag
tacgaggacgtggcgggcaagggcgcgcagcagatcggcttcgacgaggtgccgctcgcg
caggcgtccgagtatgcggcggaagacgccgacatcacgctgcaactgcatcacgcgctg
tatccgcagatcgcgcgcgagccgggcctcacgcgcgtgtatcgcgacatcgagctgccg
gtgtcgctcgtgttgcgcaagatggagcgcaccggcgtgctgatcgacggcgacaggctg
agccgccagagcggcgagatcgcgacgcggctcgtcgcgctcgagcaggaggcgtacgcg
ctcgcgggcggcgaattcaatctcggctcgccgaagcagatcggccagattttcttcgag
cggctgcaattgcccgtcgtcaagaagacgccgagcggcgcgccgtcgaccgacgaggag
gtgctgcaaaagctcgccgaggactatccgctgccgaagctgttgcttgagcaccgcggc
ctgtcgaagctgaaatcgacctataccgacaagctgccgcgcatggtcaatccggacacg
ggccgtgtgcacacgaactatgcgcaggcggtggcggtcaccgggcggctcgcgtcgaac
gatccgaacctgcagaacatcccggtgcgcacggccgaagggcggcgcatccgcgaggcg
ttcgtcgcgccgccgggcagcaagatcgtgtccgccgactattcgcaaatcgagctgcgc
atcatggcgcacatctcggaggacgaatcgttgctgcgcgcgttcgcgcacggcgaggac
attcaccgcgcgaccgcggcggaggtgttcggcgtgacgccgctcgaagtgacgtccgat
cagcggcgcatcgcgaaggtgatcaacttcggtctgatctacgggatgagttcgttcggc
ctcgcgtcgaatctcggcatcacgcgcgatgcggcgaagctctatatcgaccgctacttc
ctccgctatccgggcgtcgcccgctacatggaggaaacgcgcatgcgggcgaaggagaag
ggctacgtcgaaaccgtgttcggccgccgcctgtggctgcccgagatcaacggcggcaac
gggccgcgccgccaggccgccgagcgcgcggcgatcaacgcgccgatgcagggcacggcc
gccgatctgatcaagctgtcgatgatcgcggtcgacgactggctcgagcgtggcggcttg
cgcgcgcgaatgatcatgcaggtgcacgacgaactcgtgctcgaggtgccggaggacgag
ctgtccatcgtgcgcgagaagctgccggagatgatgtgcggcgtcgcgaaactgaaggtg
ccgctcgtcgccgaggtcggcgtcggcgagaactgggaagaggcgcactga
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