Burkholderia pseudomallei MSHR346: GBP346_A0035
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Entry
GBP346_A0035 CDS
T00894
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase 2
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
bpr
Burkholderia pseudomallei MSHR346
Pathway
bpr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GBP346_A0035 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpr03400
]
GBP346_A0035 (alkA)
Enzymes [BR:
bpr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
GBP346_A0035 (alkA)
DNA repair and recombination proteins [BR:
bpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GBP346_A0035 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
ACQ98777
LinkDB
All DBs
Position
I:27929..28870
Genome browser
AA seq
313 aa
AA seq
DB search
MSAAVEPAAVRPDSVVLELPFKSPYDWPRVLRFFAGRAIPGVEAVGDGAYRRTVDHHGAI
GTLTVRKHPRKRCLVALVEGDAARHADAAFAARLSTMFDLQADPAAIGAHLARDAWFASL
VGAAPGLRVPGAWSGFELIVRAIVGQQVSVKAATTIVGRLVERAGERLAPHAPGAIGWRF
PEPAALAACDVSRIGMPGKRAAALQGVARAVASGDVPLDAYASDPAGVRAALLALPGIGP
WTVEYVAMRAWRDADAWPATDLVLMQAIVARDPALDRPASQRLRADAWRPWRAYAAMHLW
NEIADRAGSARGG
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgccgccgtcgaaccggccgccgtgcggcccgacagcgtcgtgctcgagctgccg
ttcaaatcgccgtacgattggccgcgcgtgctgcgcttcttcgcggggcgcgcgattccg
ggcgtcgaggcggtcggggacggcgcgtatcggcgcacggtcgaccatcacggcgcgatc
ggcacgttgacggtgcgcaagcatccgcgcaagcgctgtcttgtcgcgctcgtcgagggc
gatgcggcgcggcatgcggacgctgcattcgccgcgcggctttcgacgatgttcgatttg
caggccgatccggccgcgatcggcgcgcatctcgcgcgcgacgcgtggttcgcgtcgctc
gtcggcgccgcgcccggcctgcgcgtgccgggcgcgtggtcgggcttcgagctgatcgtg
cgcgcgatcgtcggccagcaggtgagcgtgaaggccgcgacgacgatcgtcgggcggctc
gtcgagcgcgcgggcgagcggcttgccccgcacgcgccgggcgcgatcggctggcggttt
ccggagcccgccgcgctcgccgcgtgcgacgtgtcgcgcatcgggatgccgggcaagcgt
gccgcggcgctgcagggcgtcgcgcgcgcggtcgcctcgggcgacgtgccgctcgatgcg
tacgcgagcgatccggccggcgtgcgcgccgcgctgctcgcgctgccggggatcggcccg
tggaccgtcgaatacgtcgcgatgcgcgcatggcgcgacgccgacgcatggcccgcgacc
gacctcgtgctgatgcaggcgatcgtcgcgcgcgacccggcgctcgaccggccggcaagc
cagcgcctgcgcgccgatgcgtggcggccgtggcgcgcgtatgcggcgatgcatctatgg
aacgagatcgccgatcgcgccggttcggcgcgcggcggatag
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