KEGG   Burkholderia pseudomallei MSHR346: GBP346_A0111
Entry
GBP346_A0111      CDS       T00894                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
bpr  Burkholderia pseudomallei MSHR346
Pathway
bpr00300  Lysine biosynthesis
bpr00470  D-Amino acid metabolism
bpr01100  Metabolic pathways
bpr01110  Biosynthesis of secondary metabolites
bpr01120  Microbial metabolism in diverse environments
bpr01230  Biosynthesis of amino acids
Module
bpr_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:bpr00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    GBP346_A0111 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    GBP346_A0111 (dapF)
Enzymes [BR:bpr01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     GBP346_A0111 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: ACQ94988
LinkDB
Position
I:complement(97171..98040)
AA seq 289 aa
MKLSFTKMHGAGNDFVVLDGYTRALPPLTGAQVRALADRHFGIGADQLLLVEKPTVDGAD
FKYRIFNCDGGEVEHCGNGARCFVKFVRDHGLTGKASVRVEVKHGVITLTMQDNGEVVVD
MGAPVFEPARVPFDASGLDGRREGADTLWPLPVNGVTRWISVVSMGNPHAVQIVDDAEAF
AVRVDGPAIERDPRFPQRVNAGFMQIVSRHEVNLRVYERGAGETLACGTGACAAVAAGIR
RGRLDSPVTVHTHGGTLTISWNGACDERAPLMMAGPATTVFEGVIELPA
NT seq 870 nt   +upstreamnt  +downstreamnt
atgaaactctcgttcaccaagatgcacggcgcgggcaacgacttcgtcgtgctcgacggc
tacacccgcgcgctgcccccgctcaccggcgcgcaggtgcgcgcgctcgccgaccgccac
ttcgggatcggcgccgatcagttgctgctcgtcgaaaagccgaccgtcgacggcgccgat
ttcaaataccggatcttcaactgcgacggcggcgaagtcgagcactgcggcaacggcgcg
cgctgcttcgtcaagttcgtccgcgaccacgggctcaccggcaaggcgagcgtgcgcgtc
gaggtgaagcacggcgtgatcacgctgacgatgcaggacaacggcgaggtcgtcgtcgac
atgggcgcgcccgtgttcgagccggcgcgcgtgccgttcgacgcgagcggcctcgacggc
cgccgcgagggcgccgacacgctctggccgctgcccgtgaacggcgtgacgcgctggatc
tcggtcgtgtcgatgggcaatccgcacgcggtgcagatcgtcgacgacgccgaggcgttc
gcggtgcgcgtcgacgggccggcgatcgagcgcgatccccgtttcccgcagcgcgtgaac
gcgggcttcatgcagatcgtgtcacgtcacgaagtgaacctgcgcgtctacgagcgcggc
gcgggcgaaacgctcgcgtgcggcacgggcgcgtgcgcggccgtcgcggccggcatccgg
cgcgggcgactcgattcgcccgtcacggtccatacgcacggcggcacgctgacgatctcg
tggaacggcgcgtgcgacgagcgcgcgccgctcatgatggccggccccgcgaccaccgtc
ttcgaaggcgtgatcgagctgcccgcctga

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