Burkholderia pseudomallei MSHR346: GBP346_A2303
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Entry
GBP346_A2303 CDS
T00894
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
bpr
Burkholderia pseudomallei MSHR346
Brite
KEGG Orthology (KO) [BR:
bpr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bpr03009
]
GBP346_A2303 (rumA)
Enzymes [BR:
bpr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
GBP346_A2303 (rumA)
Ribosome biogenesis [BR:
bpr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GBP346_A2303 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
Cons_hypoth95
TRM5-TYW2_MTfase
Methyltransf_23
RrnaAD
Methyltransf_11
Methyltrans_SAM
Methyltransf_15
MTS
TRAM
Methyltr_RsmB-F
PCMT
Ubie_methyltran
Methyltransf_32
N6_N4_Mtase
Motif
Other DBs
NCBI-ProteinID:
ACQ96522
LinkDB
All DBs
Position
I:complement(2271256..2272713)
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AA seq
485 aa
AA seq
DB search
MAGVRLQSRLSPTIVRQEKLVSEAVPLSTRRASSAGDAPGRAPVLDIDSLDMEARGVGRV
VDENGEPGKVIFVEGALPGERVTYSSFRRKPTYEQAQVVDILRPSVMRTQPKCAFFGTCG
GCSMQHLDMRAQVAIKQRVLEDNLWHLAKLRAEAMFAPIHGPSWGYRYRARLTVRHVAKK
GGVLVGFHEKKSSYVADMTSCEVLPPHVSAMLVPLRRLVEQLSIRDRMPQIELAVGARVT
ALVLRVLEPINAADEALLREFADTHRVQFWLQPKGPDTVAPFYPLDAQLDYTLPEFGIRM
PFKPTDFTQVNHQINRVLVGRALRLLAPERGDRMLDLFCGIGNFTLPLARLAREVVGIEG
SDALTARALENAKENGVDGHTSFACRNLFEVTADDLRALGAFDKFLVDPPREGALAVSKA
LAEIAQSGAGPLPARIVYVSCNPSTLARDAGLLVHEAGYRLKGAGVVNMFPHTSHVESIA
LFERD
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
ttggcgggcgttcgtctacaatctcgcctttcccccacaatcgttcgtcaggaaaagctg
gtgtcagaagccgtccccctctccacgcgccgcgcatcgtccgcgggcgacgcgcccggt
cgcgccccggttctcgatatcgattcgctcgacatggaggcgcgcggcgtcggccgcgtc
gtcgacgaaaacggcgagcccggcaaggtgattttcgtcgagggcgcgttgcccggcgag
cgcgtcacttattcgagctttcgccgcaagccgacctacgagcaggcgcaggtcgtcgat
attctgcgcccgagcgtgatgcgcacgcagccgaaatgcgcgtttttcggcacgtgcggc
ggctgctcgatgcagcatctcgacatgcgcgcgcaggtcgcgatcaagcagcgcgtgctc
gaggataacctctggcatctcgcgaagctgcgcgccgaggcgatgttcgcgccgattcac
gggccgtcgtggggctatcgctatcgtgcgcgcctcaccgtgcgccatgtcgcgaagaag
ggcggcgtgctcgtcggcttccacgagaaaaagagcagctacgtggccgacatgacgagc
tgcgaagtgctgccgccgcacgtgtcggcgatgctcgtgccgctgcgccggctggtcgag
caattatcgatccgcgatcgcatgccgcagatcgagctcgcggtcggcgcccgggtgacg
gcgctcgtgctgcgcgtgctcgagccgatcaacgcggccgacgaggcgctcctgcgcgaa
ttcgccgacacgcatcgcgtgcagttctggctgcagccgaaagggccggatacggtcgcg
ccgttctatccgcttgacgcgcagctcgattacacgctgccggaattcgggatccggatg
ccgttcaagccgaccgatttcacgcaggtcaatcaccagatcaaccgcgtgctcgtcggc
cgcgcgctgcggctgctcgcgcccgaacgcggcgatcgcatgctcgatctgttctgcggg
atcggcaacttcacgctgccgctcgcgcggctcgcacgcgaagtggtcggcatcgagggc
agcgacgcgctgactgcgcgcgcgctcgagaatgcgaaggaaaacggcgtcgacggccat
acgtcgttcgcgtgccgcaacctgttcgaggtgacggcggacgatctgcgcgcgctcggc
gcattcgacaagttcctggtcgatccgccgcgcgaaggcgcactcgcggtatcgaaggcg
ctcgccgagatcgcgcaaagcggcgcggggccgttgcctgcgcggatcgtgtacgtgtcg
tgcaacccgtcgacgctcgcgcgagacgcggggctcctcgtgcacgaggcgggttatcgg
ctcaagggcgcgggcgtcgtcaacatgttcccgcatacctcgcatgtcgaatcgatcgcg
ctgttcgagcgcgattga
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