Burkholderia pseudomallei MSHR346: GBP346_A3872
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Entry
GBP346_A3872 CDS
T00894
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bpr
Burkholderia pseudomallei MSHR346
Brite
KEGG Orthology (KO) [BR:
bpr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpr03016
]
GBP346_A3872
Enzymes [BR:
bpr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
GBP346_A3872
Transfer RNA biogenesis [BR:
bpr03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
GBP346_A3872
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
2H-SAK
Acb1
Motif
Other DBs
NCBI-ProteinID:
ACQ96705
LinkDB
All DBs
Position
I:complement(3718535..3719095)
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AA seq
186 aa
AA seq
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MTMAGDRLRCFVALTLDRASRDALAALPVAAGARRTPRDQLHVTIAFLGAIERAKSELLG
ARIPALAAAGAVPPVDVERVVCWPSTAHARLVVAELAPQPSLLALGERVGGALRALGLPP
DSRAFKPHVTIARFPRDAHRVTIDGACGAERRTPLALRFETLTLYESVLTRMGAEHRVLA
AAALPA
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgacgatggcgggcgaccggttgcgctgcttcgtcgcgctgacgctcgatcgggcgtcg
cgcgacgcgctggccgcgctgcccgtcgccgccggcgcgcggcgcacgccgcgcgaccaa
ctgcacgtgacgatcgcgttcctcggcgcgatcgagcgcgcgaagagcgaactgctcggc
gcgcgcatccccgcgctcgcggcggccggcgcggtgccgcccgtcgacgtcgagcgcgtc
gtctgctggccgagcaccgcgcatgcgcggctcgtcgtcgcggagctcgcgccgcagccg
tcgttgctcgcgctcggcgagcgggtgggcggcgcgctgcgcgcgctcggcctgccgccc
gacagccgtgcgttcaagccgcacgtgacgatcgcgcggtttcctcgcgacgcgcatcgc
gtgacgattgacggcgcgtgcggcgccgagcgccgcacgccgctcgcgttgcggttcgaa
acgctcacgctctacgagagcgtcctcacgcgcatgggcgccgagcatcgggtgctcgcg
gcagcggcgctgccggcataa
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