Burkholderia pseudomallei MSHR346: GBP346_A4026
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Entry
GBP346_A4026 CDS
T00894
Name
(GenBank) RNA polymerase sigma factor for flagellar operon (Sigma-F factor)(Sigma-28)
KO
K02405
RNA polymerase sigma factor FliA
Organism
bpr
Burkholderia pseudomallei MSHR346
Pathway
bpr02020
Two-component system
bpr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bpr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GBP346_A4026
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GBP346_A4026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpr03021
]
GBP346_A4026
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
bpr02035
]
GBP346_A4026
Transcription machinery [BR:
bpr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GBP346_A4026
Bacterial motility proteins [BR:
bpr02035
]
Flagellar system
Flagellar assembly proteins
Stator
GBP346_A4026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HopW1-1
UPF0122
Motif
Other DBs
NCBI-ProteinID:
ACQ98431
LinkDB
All DBs
Position
I:complement(3856788..3857522)
Genome browser
AA seq
244 aa
AA seq
DB search
MMYNAQGKISQDEVLTQYAPLVRRLGLQLVAKMPASVDLDDLIQAGMIGLLDAASRYKED
QGAQFETYATQRIRGAMLDELRSNDWLPRSLRKTSREVEHAVHQVEQRLGRSANETEIAA
HLQMPLDEYQSMLQDLHGSQLVYYEDFDRSADDEPFLDRYRADHSDPLSALLDEHLRSAL
VDAIERLPEREKLLMSLYYERGLNLREIGAVLEVSESRVCQLHSQAVARLRAKLREQAWV
GTES
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgatgtataacgctcaaggcaagatttcccaggacgaagtgctgacgcaatacgcgccg
ctcgtgcgtcgtctcggcctgcagctcgtcgcgaagatgccggcgagcgtggacctcgac
gatctgatccaggcgggcatgatcggcctgctcgacgcggcgagccgctacaaggaagat
cagggcgcgcagttcgagacctacgcgacgcagcgcatccgcggcgcgatgctcgacgag
ctgcgcagcaacgattggctgccgcgcagcctgcgcaagacctcgcgcgaagtcgaacat
gcggtgcatcaggtcgagcagcggctcggccgctcggcgaacgagacggagatcgccgcg
cacctgcagatgccgctcgacgaataccagtcgatgctgcaggatctgcacggcagccag
ctcgtctactacgaggacttcgaccgctcggccgacgacgagccgtttctcgaccgctac
cgcgccgatcacagcgatccgctgtcggcgctgctcgacgagcatctgcgcagcgcgctc
gtcgatgcgatcgagcgcctgccggagcgcgagaagctgctgatgtcgctgtactacgag
cgcgggctgaacctgcgcgagatcggtgcggtgctcgaggtgagcgagtcgcgcgtgtgc
cagttgcatagccaggcggtcgcgcggctacgcgcgaagctgcgcgagcaggcgtgggtc
ggcacggagagctga
DBGET
integrated database retrieval system
