Burkholderia pseudomallei MSHR346: GBP346_B2471
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Entry
GBP346_B2471 CDS
T00894
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
bpr
Burkholderia pseudomallei MSHR346
Pathway
bpr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
GBP346_B2471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpr03400
]
GBP346_B2471
DNA repair and recombination proteins [BR:
bpr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
GBP346_B2471
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
EEP51850
LinkDB
All DBs
Position
I:complement(2359240..2360355)
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AA seq
371 aa
AA seq
DB search
MARMIWKGAISFGLVHVPVQLYPATRTVKPSFRLLDKRSLDPVGYRQINKRTGKAVPRED
IVRGYEYEKERYVILTDEEIRAANPESTQTVDILTFVDDEAVSFLYLDTPYYLVPDRGGE
KVYALLRDALKRSGKIGIALVVMRDRQHLGAVIPVGPLLALDTLRWQDELRPLAEIDAPA
ADAKKAGVSAREFEMAAKLIDDMSGDWSPDDYHDTFRDDILALVDRKVREGRVEEIAQED
TAPARRTADIVDLTELLKRSLGRAKRPRRAPDGGANERGDSGEGGDSGEGGEGGGRGGGE
LARELERSVGGTHGGRGGGRKKAEPHAPPRKRAQAAATKRGKQAKPRDGASRASARTAAK
KPAAARKRRAA
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcatgatctggaaaggcgcgatcagcttcgggctcgtgcacgtgccggtgcag
ctgtatccggccacgcgcaccgtgaagccttcgtttcgcctgctcgacaagcgttcgctc
gatccggtcggctatcggcagatcaacaagcgaaccggcaaggccgtgccgcgcgaggac
atcgtgcgcggctacgagtacgagaaggaacgttacgtgatcctgaccgacgaggagatt
cgcgcggcgaatccggaatcgacgcagacggtcgacatcctgacgttcgtcgacgatgag
gcggtgtcgttcctctatctcgacacgccgtactacctcgtgcccgatcgcggcggcgag
aaggtctacgcgctgctgcgcgacgcgctgaagcgctcgggcaagatcggcatcgcgctc
gtcgtgatgcgcgaccggcagcatctgggcgcggtgattccggtcgggccgctgctcgcg
ctcgacacgctgcgctggcaggatgagctgcggccgctcgcggagatcgacgcgcccgcc
gccgacgcgaagaaggcgggcgtgagcgcgcgcgagttcgagatggcggcgaagctgatc
gacgatatgtccggcgactggtcgcccgacgattatcacgacacgttccgcgacgacatc
ctcgcgctcgtcgacaggaaggtgcgcgaagggcgggtcgaggaaattgcgcaggaggac
acggcgccggcgcggcgcaccgcggacatcgtcgatctgaccgagctgctcaagcgcagc
ctcggccgcgcgaagaggccgaggcgcgcaccggacggcggcgcgaacgaacgcggcgac
agcggcgaaggcggcgacagcggcgaaggcggcgaaggcggcggacgaggcggcggcgaa
ctcgcgcgcgagctcgagcgaagcgtcggcggaacgcacggcgggcgtggcggcggccgc
aagaaggccgagccgcatgcgccgccgcgcaagcgcgcgcaggcggccgcgacgaagcgg
gggaaacaggcgaagccgcgcgacggcgcgtcgcgcgcgtcggcgcgcacggccgcgaag
aagcccgccgccgcgcgcaagcggcgcgccgcctga
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