Beta proteobacterium CB: D521_0476
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Entry
D521_0476 CDS
T02483
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bprc
Beta proteobacterium CB
Pathway
bprc03030
DNA replication
bprc03430
Mismatch repair
bprc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bprc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D521_0476
03430 Mismatch repair
D521_0476
03440 Homologous recombination
D521_0476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bprc03032
]
D521_0476
03400 DNA repair and recombination proteins [BR:
bprc03400
]
D521_0476
Enzymes [BR:
bprc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D521_0476
DNA replication proteins [BR:
bprc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D521_0476
DNA repair and recombination proteins [BR:
bprc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D521_0476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AGG33045
LinkDB
All DBs
Position
434185..437811
Genome browser
AA seq
1208 aa
AA seq
DB search
MASPRFVHLRVHSEFSITDGVVRIDDAVAAAEKDGMGALALTDLSNLFGLVRFYSAARSS
GIKPIAGADVWISNPQDPDQPHRLLLLVQNHSGYLNLCQLLSKASLENQSRGRAEVDLKW
FSEPASKAEDKAANRTLAYGLIALSGGRWGDVGAALLAGQEDQAKEAAQHWAKLFPNTFY
IEVQRGGHPQDEKQLQLACHLASELDLPIVATHPVQFMQRSDFTAHEARVCIAEGELLGN
PRRTKKFNQEQYFLSQEEMEKRFADLPVALANSVEIAKRCNLSLTLGQPRLPDFPTPPGI
TLDDYLLQQSEIGLKRHMERNFPDPEERAKEEARYHERLVFEVKTIAQMGFPGYFLIVAD
FINWAKNNGVPVGPGRGSGAGSLVAYSLGITDLDPLRYNLLFERFLNPERVSMPDFDIDF
CQHGRDRVIQYVKDKYGKDAVSQIATFGTMAARAAIRDVGRVLEQGYNFVDGIAKLIPNK
PGQYMTIEMAKKEEKQLGEREKNEDEVRQLLSLAQQLEGMTRNVGMHAGGVLIAPGRLTD
FCPLYTQEAKDSKDQESGSVISQFDKDDVEAIGLVKFDFLGLTTLTILAAAEKWIKALHA
DRKDWNIGEIPLDDEKAFEVLKNANTVAVFQLESRGMQGMLREAKPDRFEDIIALVALYR
PGPMDLIPDFIERKHGRQKVEYPDPRIEPVLQETYGIMVYQEQVMQMAQMIGGYSLGGAD
MLRRAMGKKKPEEMAQHRKIFSDGAKAGGITEGKANEIYDLMERFAGYGFNKSHAAAYAL
LAYQTAWLKAYYPAEFMAANLSLAMDDTDKVKILYDDCLANNIRVFSPDINTGVYVFTPL
RAPDAAPDSPISHIRYGLGAVRGTGEAAIEVIVKAREAGGPFKDLFDFCARVDRRQVNRR
AIEALMRAGAFDSLYKDSIPAGGNPYDIRSTLLASLARAIEAAEQAEASINQVSLFEMAG
EEDRHLPELVREPVWSEKKRLQDEKSSLGLCLTGHMFDAYREETAHFIRQPLAKVTEGKD
QLIAGIITSARMLTGQRGRMMIATIDDGTAAIEVTLYSEVYEPNRSWLKEDELLVAKVNV
TPDKFSGGMRIVSEAVMDITGARMRFARNIHLSIDSAIDLKSLRSQIGPYLMSNRVRDPK
LGPAAASMPSASEGLKGLMLTAAVTTSGGACLMQFPEELRIYPDDACLHSLNQILAAKQT
NTVQVQYQ
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaccccgttttgtccatctacgcgtccattccgaattttcaattacggatggt
gtcgttcgcattgatgatgcggtagctgcggccgaaaaagacggcatgggggctctggcg
ctcaccgatttgagtaatttatttggcttggtccgtttttatagtgctgcacgctcaagc
ggaattaagccaattgcgggtgcggatgtttggatcagtaacccccaggacccagaccaa
ccacatcgcttattgctcctagttcaaaaccactctggctatctcaatctttgtcagtta
ttgagtaaggcctccctagaaaatcaatctcgtggtcgagctgaagtggacctcaaatgg
tttagtgagcccgcttccaaagctgaagataaagcagcaaacagaacactcgcttatgga
ttaattgccctctctggcggacgctggggtgatgtgggtgctgcgctcttagcaggccaa
gaagaccaagctaaagaggctgctcagcattgggcaaaattatttccgaatactttttac
attgaagtgcaacgtggcggccatccccaggatgaaaagcagctccagcttgcctgtcat
cttgctagcgagttagatttacctatcgttgcaacacatcctgtgcagtttatgcagcga
agtgatttcacagcgcatgaggcacgtgtctgtatcgcggagggtgagctcttaggtaat
cctcgtcgtactaagaagtttaatcaagagcagtatttcttatctcaagaagagatggaa
aagcgctttgcggatttacccgttgcactggctaattcggtggagattgccaaacgctgt
aatctctctttaactttgggtcagccgcgtttaccggacttcccaacaccgcctggtatt
acgctcgacgattatttattgcagcaatcggagattggtttgaagcgccatatggagcgc
aatttccccgatccagaagagcgtgccaaggaagaggctcgttatcacgagcgcctcgtc
tttgaggtaaagaccattgctcaaatgggttttccaggttacttcctgattgttgctgat
ttcattaactgggcaaaaaataatggcgtgccagtaggtccgggtcgaggatctggtgct
ggctctttagttgcttattcactcggtattaccgatcttgacccgctacgttacaactta
ctttttgagcgcttcttaaatcctgagcgggtatcgatgcccgactttgatattgacttt
tgccagcatgggcgcgaccgcgttattcagtacgtaaaagataaatacggaaaagatgcg
gtcagtcaaatcgctacctttggaaccatggcggcaagagcggcgattcgtgacgtgggt
cgcgtgcttgaacaaggctataacttcgttgatggtattgccaagctgattccgaataag
ccaggtcagtacatgactattgaaatggctaagaaggaagagaagcaattaggcgagcgc
gaaaagaatgaagatgaagtgcgccagcttttatctcttgcgcaacagttagaaggcatg
acccgtaacgtgggtatgcatgcgggtggtgtactgattgcccctggccgcttgacagat
ttttgtccactctatacacaagaagcaaaagactcaaaggatcaagagagcggttccgtt
attagtcagtttgacaaggatgacgtagaagctatcggtctggtgaagtttgacttcttg
ggcttgacgacgctcactattttggcggcagctgagaagtggattaaggcgctgcacgct
gatcgcaaggattggaatatcggtgagattcccctcgatgatgaaaaagcttttgaagtt
ttaaaaaatgcgaacactgtcgccgtcttccagctagaaagtcgcggcatgcaaggcatg
cttcgtgaagctaagcccgatcgtttcgaagatattattgcgctcgttgcactctatcga
ccaggtccaatggatttgatcccggactttattgagcgtaagcatgggcgtcaaaaagta
gagtatccggatccgcgtattgaacctgttctacaagaaacctacggcatcatggtctac
caagagcaggtcatgcaaatggcgcagatgatcggcggctactcacttggtggcgcggat
atgttgcgtcgagcgatgggcaagaagaagcctgaagagatggcgcagcatcgcaagatt
tttagtgatggtgcaaaggccggcggtattactgaaggcaaggccaacgagatttatgac
ttgatggagcgctttgctggctatggatttaataaatctcatgctgctgcctacgcgctc
ttagcctatcaaactgcttggctaaaggcttattacccagcagaatttatggcggccaac
ttatccctcgcaatggatgacaccgataaggtgaagatcctatatgacgattgtttggcg
aataatattcgggtattctcgccagatatcaatactggcgtttatgtatttactccacta
cgtgcaccagatgccgcccctgattctccaattagccatattcgttatggcttgggtgcc
gtaaggggtacgggtgaagctgctattgaagtaattgtgaaagcgcgagaggcgggcggc
ccatttaaagatttatttgatttctgtgcacgcgttgatcgtaggcaggtgaaccgtcga
gcgattgaagctttaatgcgtgcaggtgcctttgatagtttgtataaggactctatccct
gcgggtggcaatccttacgatattcgatctactttattggcttctcttgcgcgggcaatt
gaagctgccgaacaagccgaagcctcaatcaatcaagtgagtttatttgagatggcgggg
gaagaagatcgccacttgccagagttggtgcgcgaaccagtctggtctgaaaagaaacgc
cttcaggatgagaaaagctctctaggcctttgtctcactggccacatgttcgacgcttac
cgcgaagagactgcgcatttcattcgccagccattggctaaagtgacagaaggtaaggat
cagttgattgctgggattatcacttccgcccgaatgctgactggtcagcgtggacgtatg
atgattgcaacgattgacgatggaactgctgccattgaggtgaccctctatagtgaggtc
tacgagccgaatcgttcttggctcaaagaagatgaattactggtagcgaaagttaacgtt
actcccgacaagttttctggtggaatgcgcattgtgtctgaggcagtgatggatatcact
ggagcgcgcatgcgttttgcacgcaatatccatctgtcgatcgattcagcgattgatctc
aaatccttgcgtagccaaattgggccttacttaatgagtaatcgagtacgagatcccaag
ttgggtcctgctgcagcctctatgccaagtgccagcgaaggcttaaagggtttaatgctt
acggctgcagtcactactagtggtggagcctgcttgatgcaattccctgaagagttgcgc
atctatccagatgatgcttgcttgcatagcttgaatcaaattttggcagccaaacaaact
aacaccgttcaggttcagtatcaataa
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