Beta proteobacterium CB: D521_0922
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Entry
D521_0922 CDS
T02483
Symbol
rimO
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
bprc
Beta proteobacterium CB
Brite
KEGG Orthology (KO) [BR:
bprc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bprc03009
]
D521_0922 (rimO)
Enzymes [BR:
bprc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
D521_0922 (rimO)
Ribosome biogenesis [BR:
bprc03009
]
Prokaryotic type
ribosomal protein modification factors
D521_0922 (rimO)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AGG33491
UniProt:
M1SV60
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All DBs
Position
908549..909907
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AA seq
452 aa
AA seq
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MAGKVGFVSLGCPKALVDSELILTQLSAEGYETAKDYSGADLVVVNTCGFIDSAVEESLA
AIGEALSENGKVIVTGCLGARKNADGSDLIQSIHPKVLAVTGPHATQEVMQAIHLHLPKP
HDPFTDLLPPIGVKLTPKHYAYLKISEGCNHRCSFCIIPSLRGDLVSRPIGEVLLEAKKL
FESGVKELLVVSQDTSAYGVDIQYRTGFWDGKPVKTRMFDLVNALNQIAREHQAWVRLHY
VYPYPHVDDVLPLMAEFADHGYGVLPYLDIPLQHAHPDVLKRMKRPASGEKNIERIQAWR
AACPDLVIRSTFIAGFPGETEEEFEYLLNFLEEAQIDRAGCFAYSPVDGATANALDNPVP
DQLREDRRARFMAKAEEISINRLAKKIGKRIQVIIDRVDESGGIGRTIGDAPEIDGLVRV
LPPSKPSKRYRAGEIIKVTVISSQGHDLIAET
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtggcgggtaaagttggttttgtttccttggggtgccccaaggccttggtagattctgaa
ctcattctcacgcaactgagcgctgagggttacgagactgctaaagattattctggcgct
gatctggtcgttgtgaatacctgcggttttattgattcagccgtagaagaaagccttgcg
gcgattggcgaagccttatctgaaaacggcaaggtcatcgttactgggtgcttgggtgcc
cgaaaaaatgcagacggaagtgatctcattcagagcattcatcccaaagttcttgccgtt
acaggccctcacgccactcaagaggtgatgcaggctattcatttgcacttgccaaagccc
catgacccctttactgatttgctgccacctattggcgtcaaactcaccccaaagcattat
gcgtatctgaaaatttccgaaggatgcaatcatcgttgtagcttttgcatcatccctagc
ttgcgtggtgatcttgtatcacgacccattggcgaggtattgctagaagctaaaaaactt
tttgagtcgggcgtaaaagaattgctggttgtttcgcaagatacgagtgcatatggtgtt
gatattcaatatcgcactggcttttgggatggtaaacctgtcaaaacgcgcatgtttgat
ttggtcaacgccttaaatcaaattgcgagagaacatcaagcttgggttcgtctacattac
gtttacccttatccgcacgtcgatgatgttttgcctttaatggctgaatttgctgatcat
ggctatggcgtacttccttatttagatattccattgcaacatgcgcatcctgatgtgcta
aagcgcatgaagcgtcccgcgagtggggaaaaaaatatagagcgcattcaggcgtggcgc
gctgcatgtccggacttggttattcgcagtacatttattgccggcttccccggcgaaaca
gaagaagagtttgaatatcttttaaatttcctagaagaagctcaaattgatcgtgctggc
tgctttgcctactcgccagttgatggcgctactgcaaacgctttagataacccggtgcct
gatcaattacgtgaagatcgccgagctcgttttatggccaaggccgaagaaatttcgatt
aatcgacttgctaaaaaaataggcaagcggattcaggtcattattgatcgagtggatgaa
tcgggtggaatcggccgaaccatcggcgatgcccctgaaattgatggtttggtaagggtt
ttacccccaagcaaaccgtctaagcgctatcgtgccggcgaaatcatcaaagtgacggtg
attagctcccaagggcatgacctaatagccgaaacttga
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