Beta proteobacterium CB: D521_1111
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Entry
D521_1111 CDS
T02483
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bprc
Beta proteobacterium CB
Pathway
bprc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bprc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D521_1111 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bprc03021
]
D521_1111 (rho)
03019 Messenger RNA biogenesis [BR:
bprc03019
]
D521_1111 (rho)
Transcription machinery [BR:
bprc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
D521_1111 (rho)
Messenger RNA biogenesis [BR:
bprc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
D521_1111 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
NACHT
AAA_5
Motif
Other DBs
NCBI-ProteinID:
AGG33679
LinkDB
All DBs
Position
1104501..1105763
Genome browser
AA seq
420 aa
AA seq
DB search
MQLSELKVLHVSALLEMAASLEIENTQRMRKQELMFAILKKRAKEGESVFGDGTLEVLPD
GFGFLRSPDASYMASPDDIYISPAQIRRFNLHTGDSVEGEVRTPKDGERYFALVKVDKIN
GLPPEALKNRIMFENLTPLHPNRVVQLERDIKAEENLTGRIIDMISPIGYGQRGLIVSSP
KSGKTVMMQHIAHAISANNPDAILIVLLVDERPEEVTEMQRSVRGEVVASTFDEPAVRHV
QVAEMVIEKAKRLVEMKKDVIILLDSITRLARAYNTVIPSSGKVLSGGVDANALQRPKRF
FGAARNVEEGGSLTIIATALIETGSRMDDLIYEEFKGTGNMEVHLERRLAERRVYPSINL
NKSGTRREELLVKAENLQKIWVLRKLLADMDDIEAMNFIVDKLKSTKNNGEFFDLMRKGG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcaattatctgaactcaaagtactccacgtatccgccctacttgaaatggcagccagc
ctggagattgaaaatacacaacgtatgcgcaaacaagagttgatgtttgccattctcaag
aagcgcgccaaggaaggcgaatctgttttcggtgacggtactttggaagtactgcctgat
ggctttggtttcttacgctccccagatgcctcttatatggcttctccggacgacatctac
atctcccctgcacagatccgccgctttaacctacacactggtgacagcgttgaaggcgag
gttcgcacccctaaagatggtgagcgttactttgctttagttaaagtggacaagatcaac
ggtttgcctcctgaggctttaaagaaccgcatcatgttcgagaacttaacgcctttgcac
ccaaatcgcgttgttcaattagagcgtgacatcaaagctgaagagaatttaactggccgc
atcattgatatgatctccccgattggctatggccagcgtggcttgatcgtgtcttctcct
aaatccggtaagaccgtgatgatgcagcacattgctcatgcgatttctgcaaataaccca
gatgcgatcttgatcgtattgttggttgatgagcgccctgaagaagttactgaaatgcaa
cgctctgtacgtggtgaagtggttgcttctacatttgatgagccagctgtacgtcacgtt
caagttgccgagatggtgattgaaaaggccaagcgtttagttgagatgaagaaagacgtc
atcatcttgcttgactcgattacccgccttgctcgtgcttacaacaccgtcatcccttca
tccggaaaagtactttctggtggtgtggatgcaaacgcattacaacgtccaaaacgcttc
ttcggtgcagcgcgtaacgtggaagaaggtggttcactcaccatcatcgctaccgccttg
attgaaacaggtagccgtatggatgacctcatttacgaagagttcaaaggtaccggcaac
atggaagtgcaccttgagcgtcgtttggctgagcgtcgtgtgtacccatcgattaacctc
aacaaatctggcacccgccgtgaagagttgctggttaaagctgaaaacctccagaaaata
tgggttttacgtaaattattggccgatatggacgatattgaggcaatgaactttatcgtt
gataagctcaaatccaccaaaaataatggtgaattcttcgatttaatgcgtaagggtggc
taa
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