Anaerostipes hadrus: CL2_27080
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Entry
CL2_27080 CDS
T02612
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bprl
Anaerostipes hadrus
Pathway
bprl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bprl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CL2_27080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bprl03021
]
CL2_27080
03019 Messenger RNA biogenesis [BR:
bprl03019
]
CL2_27080
Transcription machinery [BR:
bprl03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CL2_27080
Messenger RNA biogenesis [BR:
bprl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CL2_27080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA
Spore_III_AA
OB_RNB
AAA_22
ATPase_2
S1CSD-TOTE-2
NACHT
AAA_24
AAA_14
AAA_25
HeH
UFL1
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
CBL39524
UniProt:
D4MVV8
LinkDB
All DBs
Position
2687110..2688477
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AA seq
455 aa
AA seq
DB search
MTYEKKSVIELREIAKERKIKGISTLKKQELIKVLENYDQEQSKQKEEPQIQREPKQSYS
EHQERKHHQKEFPKNIKSLDSGEKAHGILEVMPDGYGFIRCENYLPGENDIYVSPAQIRK
FNLKTGDILTGAIRIKTQSEKFSALLFVESVNGYKPEMAARRQHFEDLTPIFPNERLGME
TERSSIPMRMVDLLSPVGKGQRGMIVSPPKTGKTTLLKQMAQSISQNYKDIKLIVLLIDE
RPEEVTDFKESIEGKNVEVIYSTFDELPEHHKRVSEMVLERAKRLVEHKEDVVILLDSIT
RLARAYNLTVPPSGRTLTGGLDPAALYMPKKFFGAARNMREGGSLTILATALVETGSKMD
DVIFEEFKGTGNMELVLNRRLAEKRIFPAVDIAKSGTRREELLLTKDEREVVTALHKELS
GNRSEEFMEQMLDLFKRTQNNKEFVALTKRSLLRK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgacatatgaaaaaaagtcggtaattgaattacgtgaaattgccaaagaaagaaaaata
aagggcatttcgaccttaaagaaacaagaactgatcaaagtattagaaaactatgatcag
gaacaatcaaaacaaaaggaagaaccgcagatacaacgtgaaccaaaacaatcttattca
gagcatcaagaaagaaaacatcaccagaaagaatttccaaagaatataaaaagtctggac
agcggagaaaaagcacatgggattctggaagttatgccagatgggtatggtttcatccga
tgtgaaaactatcttccaggggagaatgatatctatgtatctccggctcagatccgcaaa
ttcaatttaaaaacaggagacatcttaacaggagcgatccgtatcaaaacccagagtgag
aaattcagtgccttattattcgtagaatctgtcaatggatataagccagaaatggcagca
agaagacagcattttgaagatctgacaccaatctttcctaacgaaagattaggaatggaa
acagagagatcatccataccaatgcgaatggttgatctgctatcacccgttggaaaaggg
cagcgaggaatgatcgtatcgcctccaaagacaggaaagacaacactgttaaaacaaatg
gcacaaagtatcagtcagaattataaagatatcaaattaatcgtattattgatcgatgaa
cgaccagaagaggtcacagattttaaagaatctatcgaaggaaagaacgttgaagttatt
tattccacatttgatgaattaccagaacaccacaagagagtgtcagagatggtattagaa
cgtgcaaaacgtctcgtagaacataaagaagatgtcgtaattttattagatagtatcaca
agacttgcaagagcttacaaccttacagtaccgccaagcggaagaacattaactggtgga
cttgatccagccgctctctatatgccgaagaaatttttcggtgcagccagaaatatgaga
gaaggcggaagtcttaccatccttgccacagcactcgtagaaacaggaagcaagatggac
gacgtgatctttgaagaattcaagggaacaggtaatatggaattagtcttaaaccgtcgt
ctggcagaaaaaagaatcttcccagcggttgatattgccaaatcaggaacaagaagagaa
gagctgctgcttaccaaagatgaaagagaagttgtcacagcacttcacaaagaattatcc
ggaaaccgttcggaagaatttatggaacagatgttagatttatttaaacgaacccaaaac
aacaaagaatttgtagcactaaccaaacgatcattattaagaaaataa
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