Butyrate-producing bacterium SM4/1: CL3_05950
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Entry
CL3_05950 CDS
T02610
Name
(GenBank) ATPase involved in DNA repair
KO
K03546
DNA repair protein SbcC/Rad50
Organism
bprm
Butyrate-producing bacterium SM4/1
Brite
KEGG Orthology (KO) [BR:
bprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bprm03400
]
CL3_05950
DNA repair and recombination proteins [BR:
bprm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CL3_05950
Archaeal homologous recombinant proteins
CL3_05950
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
SMC_N
Motif
Other DBs
NCBI-ProteinID:
CBL35715
UniProt:
D4MPM9
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All DBs
Position
complement(539209..542205)
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AA seq
998 aa
AA seq
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MMRSQSALPKQETRVELVFSDRGEVYRIVRSPSYERPSLRKKKDGEQAMTTQPARVSLFL
PDGSEFPGKISDVNEKIREIVGVDRGQFSQTAMIAQGEYMRLLTAGSRERKEIFSRIFDT
GVYERIQRKLRERNSELAKKLEDNGKFCLREAERIRVPEESGLASRWEQAVSSLESCPEE
ILAVSKEACSFSRMEAEKERREDERLVDELHRLGSRIERARRVSELKEQEKAAEEHLRLL
QSSQEVFEEKKRRLKLGRQAAPVWQKEDEARKKEGEWIEAGERLGEIKEKLSALSEDFLQ
AEKDSEEAESRYRAEQPGLLEQEQELKRSLPLYRELEQCMASIRAEEVRRERTKREEEAA
AEGQEDCLKRLAALKAEREEKRDSGLNLERCRAEIERLKKRKDEVTQLGRKLKELEEREK
RLKEEQDILGRESRNYEQAADDYDRLYRIFILSQAGLLAEELREGKPCPVCGSLSHPCPA
RLLDERVTAEQLDRANKVRETADRAARERLACVRALKAETGVVKSQCEAMYEAIRKPGAD
EVKEHAVFDRQNAFQEMRELFFELQEEQRQREREEKEWEKARIRLSEIDVLMEKEEKKRE
DLERKRKELSGELAGTESRLSSLKARYEEQKKQLLFETGEQAEERLSRIQEAAGKLLAEK
EKAEKRKEELGRQTGLLKGRLASEEEKERKLLSQKEQIYGEWQELLQKMGFSGEEEYRRA
IFKEGEQERLEADISQYEQSLTAASSALLQCQKSLEGLEEEALSPLLEKEEAMKQERRLA
SFRLSESASRLAENEGACRELERLLGKRGRLLEEYGPVNRLCLAADGKVSGTARMDFQTY
VQRQYFSQMIHAANLRLRRMTQGQFLLRCREFGDLSLRGEAGLDLDVYSVDTDSVRDVKT
LSGGEAFLAALSMALGMADVIQNTAGSVEMDALFIDEGFGSLDDEARARAISVLKELSGG
KRMIGIISHVAELREQMGRKIVVKKGEEGSFIRLETEE
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgcagccagtctgccttaccaaagcaggagaccagggtggaactggtattttca
gacagaggagaggtttaccggattgtgagaagcccctcctatgaacgtccgagtctgaga
aagaagaaggacggggagcaggccatgacgacccagccggccagagtatccctgtttctt
ccggacggctcggaatttcccggaaagatttcagatgtcaatgaaaaaatacgggagatt
gtgggagttgacagagggcagttttcacagacagccatgattgcccagggggagtacatg
aggcttctcacagcaggctccagagagagaaaggagattttttcgagaatttttgataca
ggagtgtatgagcggattcagcgaaagctaagagagcgaaacagcgagcttgcaaagaag
ctggaggacaatgggaagttctgcctgcgggaagctgagcgcatccgtgtgcccgaggag
agcggacttgcctccaggtgggagcaggcagtttccagcctggagagctgcccggaagag
attctggctgtttcaaaggaggcgtgcagcttcagcaggatggaggctgagaaggagcgc
agggaggatgagagactggtcgatgagctgcacaggctgggcagcaggattgagagagcc
cggcgcgtgtctgagcttaaagagcaggagaaagcggcggaggaacacctgcgcctgctc
cagagttctcaggaggtgtttgaagagaaaaagagaaggctaaaactgggcaggcaggcg
gcgccggtctggcagaaggaggacgaagccaggaaaaaggagggagagtggatcgaagcg
ggggagaggctcggggagataaaggaaaaactctcagcgctttcggaagattttttgcag
gcagagaaggacagcgaagaagcagaaagcagataccgcgcagagcagccgggactttta
gagcaggagcaggaactgaaacgctcccttcctctctaccgtgagctggaacagtgcatg
gcctccatccgtgcagaggaggttcgcagggagaggacaaagagggaggaggaggctgcc
gctgaagggcaggaggactgtctgaaacgcctggctgccctgaaggcggagagagaggaa
aaaagagacagcggcctgaacctggaacggtgcagggctgagatagagcggctgaaaaag
agaaaggacgaagttacccagcttggacgaaagttaaaggagctggaagagagggagaaa
cgcttaaaagaggagcaggatattctgggcagggagagcaggaactatgagcaggccgcc
gatgactacgacaggctgtaccggatatttatactgtcccaggcggggcttctggcagag
gagctcagggagggaaagccctgcccggtctgcggttccttaagccatccctgccctgcc
cggcttctggatgagcgcgtgacggcagaacagctggatcgtgcaaataaagtgagagaa
acggctgacagggctgcgagagagcgcttagcctgtgtgcgggccctgaaagccgagaca
ggggtagtaaaaagccagtgtgaagctatgtatgaggccatcagaaagccaggggcggat
gaagttaaagaacacgcggtctttgacaggcagaatgcctttcaggaaatgagagagctg
ttttttgaacttcaggaagagcagaggcagagagagcgggaagaaaaagagtgggagaag
gccaggatccgcctgtcagagattgacgttttgatggagaaggaggagaaaaaaagagag
gatctggaaaggaagagaaaggaactctccggagagctggcagggacggagtccaggctg
agcagcctgaaggcgagatacgaggagcagaaaaagcagctcctctttgagacaggtgag
caggcagaggagaggctttccaggatacaggaggctgccggaaagctcctggccgaaaag
gagaaggcggaaaaaaggaaggaggagcttggaaggcagaccggccttctgaaggggcgg
ctggcctccgaggaggaaaaagagaggaagcttcttagtcagaaagagcagatttacggt
gagtggcaggagcttctccagaaaatgggattttcaggagaggaggaatacaggagagcg
atttttaaggagggggaacaggagcgcctggaagctgatatttcacagtacgagcagagt
cttactgccgcctcttccgcccttttgcagtgccaaaaaagcctggagggattagaagag
gaggcgctttcgcctctcctcgagaaggaagaggccatgaagcaggagcggcggcttgcc
tctttcaggctttctgagtcagcctccagactggcggaaaatgagggagcctgcagggag
cttgaaaggctccttggaaagagagggaggcttctcgaagaatacgggccggtcaaccgt
ctctgcctggctgcagacgggaaggtgagcggcacggcgcggatggatttccagacctat
gtgcagagacagtacttttcccagatgatccatgcggcaaacctcaggctcaggcggatg
acgcaggggcagtttctccttcggtgccgggagtttggagatctcagcctgcgcggggag
gcaggcctggatctggatgtatacagtgtggacacagacagcgtccgggatgtgaaaacc
ctctccggcggcgaggcctttctggcggccctttccatggctctcggcatggcagatgtg
atccagaatacggcggggagcgtggagatggatgcgctgtttatcgacgagggcttcggc
tcgctggatgatgaggccagagccagggcgatctccgttctcaaagagctgtcaggcgga
aagcgtatgatcggcattatctcccacgtggcagagctgagagagcagatgggaaggaaa
atcgtagtgaaaaagggggaggaaggtagcttcatccgtctggagacggaagagtag
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