Butyrate-producing bacterium SM4/1: CL3_23290
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Entry
CL3_23290 CDS
T02610
Name
(GenBank) uncharacterized domain HDIG
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
bprm
Butyrate-producing bacterium SM4/1
Brite
KEGG Orthology (KO) [BR:
bprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bprm03019
]
CL3_23290
Messenger RNA biogenesis [BR:
bprm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CL3_23290
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
HDOD
Motif
Other DBs
NCBI-ProteinID:
CBL36567
UniProt:
D4MS31
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All DBs
Position
2045050..2045997
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AA seq
315 aa
AA seq
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MKYIGQFYDGMHVSDVYLCKKKQIALTKNGKEYGALTLQDKTGTVDAKIWDLGSPGIGSF
EVLDYVYIDGDVTVFQGANQVNIRRIRKADAGEYVESDYLPVSSKDIKTMYGELRGLIDS
MKNPFLRKLAGSYFIEDKDFVRRFCFHSAAKSVHHGFVGGLLEHTLSVMKLCDYFAAVYP
RLNRDLLLTAALFHDIGKTRELSAFPENDYTDDGQLLGHIIIGTEMVSERIREIPGFPEK
MAAELKHCILAHHGELEYGSPKKPALFEALALSLADNADAKLETMNEVLTGAGDNSGWLG
YNRLFESNVRKTTEL
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaagtatatcggacagttttatgacggaatgcatgtttcagacgtgtatctttgtaag
aaaaagcagattgcactgacgaagaacggcaaggaatacggggcccttacccttcaggat
aagaccggaaccgtggacgccaagatctgggatctgggctctccgggaatcggcagcttc
gaggtgctggactatgtgtatatagatggagatgtgaccgtattccagggcgccaaccag
gtcaatatacgccggatcagaaaggcagacgcaggagaatatgtggagagtgactacctt
cccgtcagctccaaggacattaagaccatgtacggggaactgagagggctgatcgattct
atgaagaatccgttcctgagaaagctggcgggcagctacttcatagaggacaaggatttt
gtgcgccgcttctgcttccactccgcagccaagagcgtgcaccacggctttgtgggaggg
cttctggagcatacgctgagcgtgatgaagctgtgcgactattttgctgccgtctatccg
cgtctgaacagggatctgctgctgacagcggccctgtttcatgacatcggaaagaccagg
gagctgtctgccttcccggagaatgactatacggatgacgggcagcttctggggcatatt
ataatcgggacagagatggtgtctgagcggatcagggaaattcctggatttccggagaag
atggccgcagagctcaaacactgcattctggcccaccacggagagctggaatacggctcg
ccgaaaaagccggcgctgtttgaggccctggccttaagcctggcggacaacgcggacgcg
aagctggaaaccatgaacgaggtgctcaccggcgcaggcgacaacagcggctggctgggc
tacaacaggctctttgagtccaatgtgagaaagaccacggagctgtag
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