Butyrate-producing bacterium SM4/1: CL3_24230
Help
Entry
CL3_24230 CDS
T02610
Name
(GenBank) helicase, putative, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bprm
Butyrate-producing bacterium SM4/1
Pathway
bprm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bprm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CL3_24230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bprm03400
]
CL3_24230
Enzymes [BR:
bprm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CL3_24230
DNA repair and recombination proteins [BR:
bprm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CL3_24230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
UvrD_C_2
OB_YrrC
AAA_11
HHH_5
Viral_helicase1
UvrD_C
nSTAND3
UvrD-helicase
AAA_16
Cul7
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
CBL36608
UniProt:
D4MS72
LinkDB
All DBs
Position
complement(2125688..2127901)
Genome browser
AA seq
737 aa
AA seq
DB search
MICTFEHQLYKNEGNGYTVARYMVRSAASGRSNMSSVFIAVGKELPCIANAEIGMEGKWV
ESPKWGPQFRVSWFRSILPKTEDGIISYLSSDLMKGIGPVTARAIVQRFGVQTFDVLDKE
PEKLLDIRGITQQKLSVILESYRQSEGIRELLACLAPFQVTPKKAEKIQAHFGANAAAIV
RENPYRLCEVKGFGFLTVDPIARASRQFKPNDQARIRAAIRYILREGEKEGNLFLPGSAI
VEQAYPLLNQGFSEDSVTRPEIMRIGNEMAREKIELAADGANVFLKENRQEELYAAYHLV
RLLKAETAKPDIEQPLEEAQAAFGIILSERQKDAVRMVFQSNVSVITGGPGKGKTTVLRV
VLEVFKRITGREDFLLCAPTGRARKRLSESAGAPALTLHKAMYLNGEEDLSDLADSEDLL
EEELIIADEFTMSDMWLSSILFSRVRSGARLVLVGDVDQLPSVGPGAVFKAIIDSGIVPV
TVLDVFFRQAKDSRIILNADRMIRSQRTLIYGDDFQFHPAEDDHEAAKIIASLYQAELVR
AEGNPDMVQVLSPYRVKTEAGVNALNRMLREIANPASADTAQWNVGGQTFRIQDKVMQTR
NVDNISNGDIGRVVQISRRKDGNRQLQVDFGEEKRMYQEEDLEDLEFAYATSVHKSQGAE
YPVVILPVLKCFYPMLRRDIYYTGITRAKARVHLVGSKSALAIAISRTNIGTRNTMLAER
IQAEAKRQGYIPEWKAA
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgatatgtacatttgaacatcagctgtacaaaaacgagggaaatggctataccgttgcc
cgctatatggtaaggagtgccgcttcaggccggtcaaacatgtcttctgtatttatcgca
gtcggaaaagagctgccctgtattgccaatgcagagattgggatggaagggaaatgggtg
gaaagccccaaatgggggccacagttccgggtttcctggttccggtcgattcttccaaaa
acagaggatgggattatcagttacctttcttctgacttgatgaagggaatcggaccggtc
accgcgcgggcaatcgttcagagattcggtgttcagacgtttgatgttcttgataaagag
ccggaaaaacttctggacatccggggaattacccagcagaaactttctgtcatcctggaa
tcttaccggcaaagtgaaggtatccgggaactgttagcctgcctggcgccttttcaggta
acacccaaaaaggcggaaaagattcaggcacattttggcgccaatgcagccgccattgtc
cgggaaaatccttaccgcttgtgtgaagtaaaagggttcggatttctgaccgttgacccc
atagccagagccagccggcagtttaaacccaacgaccaggcaagaatccgggcggcaatc
cggtatatcctgcgggaaggtgaaaaggaaggaaatctgttcctgccaggttcggcaatt
gttgagcaggcttacccgctgcttaatcagggattttctgaagattccgttacccggccg
gaaattatgcggattggaaatgaaatggccagagagaaaattgagctggctgcggacggt
gctaatgtatttttaaaggaaaatcggcaggaagaactgtatgccgcctatcatctggta
cgtcttttaaaggcagaaaccgcaaagccggatattgagcagcctttggaagaagcccag
gcagcctttggaattatcctttccgaaaggcaaaaagatgcagtccggatggtctttcaa
tccaatgtttccgtcattaccggtggaccgggcaagggaaaaacaacggtgctgcgcgtg
gtcctggaggtatttaaacggattacaggcagagaagactttctgctgtgtgcgccaacc
ggccgggccagaaaacggctttctgaaagtgccggagcaccggcgctcactctgcataag
gcgatgtacttaaacggtgaggaagacctttctgacttagcggacagtgaggatctttta
gaggaagaactcattattgccgacgagtttaccatgtcggatatgtggctgtccagcatt
ctgttttcacgggtaagaagtggggcaaggctggtattggtaggagatgtggaccagctc
ccgtccgtaggaccgggcgccgtgtttaaggcgattattgacagcggtattgtgccggtg
accgtactggatgtgtttttccgccaggcaaaggattcaaggattatcctgaatgcggac
cggatgattcgcagccaaagaactctgatttacggtgatgatttccagttccatccagca
gaagatgatcatgaggccgcaaaaatcattgcctccctttaccaggcggaacttgtgagg
gcagaaggcaatccggatatggtgcaggtgttgtccccttaccgggtaaagacagaagcc
ggcgtcaatgctttaaaccgcatgctccgggagattgccaaccctgcttcagcggataca
gcacaatggaacgttggcgggcagacatttcgcatacaggacaaggtgatgcagacaagg
aacgtggataacatatccaacggagacattggaagagtggttcaaatcagccggagaaag
gacgggaaccgccagctgcaggttgatttcggcgaggagaaacggatgtatcaggaagaa
gacctggaagacctggaatttgcatatgcaaccagtgtccataaaagccagggcgcggaa
tacccggttgtcatactcccggttttaaagtgcttttatcctatgttaaggcgggatatt
tactatacgggaatcacacgggccaaagcgcgggttcatctggtaggcagcaaatcggct
ctggcgattgcgatcagccggacgaatattggaacgagaaataccatgctcgcggagcgg
atccaggcggaagccaaacggcagggatatattccggagtggaaagcggcatag
DBGET
integrated database retrieval system
