Blautia producta: PMF13cell1_01486
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Entry
PMF13cell1_01486 CDS
T05894
Symbol
recQ_2
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bpro
Blautia producta
Pathway
bpro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PMF13cell1_01486 (recQ_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpro03019
]
PMF13cell1_01486 (recQ_2)
03400 DNA repair and recombination proteins [BR:
bpro03400
]
PMF13cell1_01486 (recQ_2)
Enzymes [BR:
bpro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PMF13cell1_01486 (recQ_2)
Messenger RNA biogenesis [BR:
bpro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PMF13cell1_01486 (recQ_2)
DNA repair and recombination proteins [BR:
bpro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PMF13cell1_01486 (recQ_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Pox_I6
Motif
Other DBs
NCBI-ProteinID:
QBE95960
UniProt:
A0A4P6LXN5
LinkDB
All DBs
Position
complement(1636446..1638386)
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AA seq
646 aa
AA seq
DB search
MDKYEILKKYFGYDTFREGQELLIDSILSGRDVLGIMPTGAGKSLCYQVPALLMDGITLV
ISPLISLMKDQVGSLNQAGVHAAFLNSSLTVNQYYKALDLARQGRYPIIYVAPERLVTEE
FLDFALHAKIAMVAVDEAHCVSQWGQDFRPSYLKIMEFIKKLPRRPVVSAFTATATKEVR
DDIMDILLLEDPEVLTTGFDRPNLYFGVQSPKNKYAVLKNYLEMHPDDCGIVYCLTRKGV
EEVCEKLRGDGFSVTRYHAGLGDAERKRNQDDFIYDKYQIIVATNAFGMGIDKSNVRFVV
HYNMPKNMESYYQEAGRAGRDGEPAECILLYGGQDVVTNQLFIDNSQENQELEPVTREMV
TERDRERLRKMTYYCFTNECLRDYILRYFGEYGENYCGNCSNCLSQFETVDVTETAKALI
GCVKSSRQRYGAAVIIDTVHGANTAKIRNYRMNENPSYGALAKVPAYKLRQVINYLLLNE
YLKVTNDEYAIVKLTEKSEEVLDDETQITMKMAKEQEREPREKKEKKTRKGAAAHLAGAE
FTEAEEQLFEILRGLRLEIAREEKVPPYIVFSDKTLTHMCILKPKTKSEMLSVTGVGEFK
YEKYGERFVSCIRENREPARVNADVQGGRRCHSFGDVGYQASETKG
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggataaatatgagatacttaaaaaatattttggttatgatacgtttcgcgagggtcag
gagctgctcattgacagtattctgtcggggagggatgttctggggataatgcccacaggt
gccggaaaatctctatgttatcaggtgcctgccctgctcatggatggcattactctggta
atatcacctcttatctcactgatgaaggatcaggttggctccctgaaccaggcgggagtt
catgccgcgtttttaaacagttcactgacagtgaaccagtattataaagcgcttgatctg
gcaaggcagggcagatatcccataatctatgtggcaccggagcggctggtgaccgaggaa
tttttggattttgcccttcatgcaaagattgctatggtggcggtggatgaggcacattgt
gtttcccagtggggacaggatttcaggcccagctatttaaaaataatggaattcatcaaa
aaactgccgagaagaccggtggtaagtgcgtttaccgccacggctaccaaggaggtaagg
gatgatattatggacatcctcctgttggaagatccggaggttttgacaacgggatttgac
aggcccaatttgtattttggggtacagtctccaaagaataaatatgcggtgctgaagaat
tatctggagatgcatcctgatgactgcggaattgtgtactgtctgaccagaaagggagtg
gaggaggtctgtgaaaagcttcgcggtgacggattttccgtgacccggtatcatgcggga
ctgggggacgcggagagaaaaagaaaccaggatgattttatatatgataaatatcagatc
attgtggcaaccaatgccttcggtatggggatcgacaagtccaatgtgcggtttgtggtg
cattataacatgcctaagaacatggagagctattatcaggaggccgggcgtgccgggcgt
gacggagagcctgcggagtgtatcctgctctatgggggacaggatgttgtgacgaaccag
ttgtttatcgacaacagccaggagaatcaggaactagaaccggtgacccgtgagatggtg
acagaacgggacagggaaaggcttcggaaaatgacctattactgctttaccaatgaatgc
cttcgtgattatatcctgcggtattttggcgaatatggagagaattactgcggaaactgt
tccaactgcctgagtcagtttgagacggtggatgtgactgagacggcaaaagcactcatc
ggatgcgtgaagagcagcaggcagagatatggggccgcagtgatcattgatacggtacat
ggggcgaatacggccaaaataagaaattacagaatgaatgagaatcccagctatggggcg
cttgcgaaagtccctgcctataagctgaggcaggttataaactatctgttattaaacgag
taccttaaggtaaccaacgatgaatatgccattgtgaagctcacggaaaagtcagaggaa
gtgctggatgatgagacacagatcactatgaaaatggcaaaggaacaggaacgtgagccc
agggaaaagaaagagaaaaagacccgaaaaggcgccgctgcccatctggccggtgcagag
tttacagaggcagaagagcagctttttgagatattgagagggcttcgcctggagattgcc
agggaggagaaggtgccgccttatatagttttctctgataagacattgactcatatgtgt
attttgaaacccaaaactaagagtgaaatgttgtctgttaccggggtcggggagtttaaa
tatgagaagtacggtgaacgatttgtgtcgtgtatcagggaaaatcgtgaacctgccaga
gttaatgcagatgttcaaggaggtcgcagatgtcattctttcggagatgttggatatcaa
gcgtccgaaactaaaggatga
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