Blautia producta: PMF13cell1_02223
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Entry
PMF13cell1_02223 CDS
T05894
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
Organism
bpro
Blautia producta
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2_assoc
SNF2-rel_dom
Helicase_C
ResIII
DEAD
ERCC3_RAD25_C
SWIM
Big_15
HDA2-3
SWI2_SNF2
Dna2
DUF2330
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QBE96676
UniProt:
A0A4P6LX26
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All DBs
Position
2526008..2529253
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AA seq
1081 aa
AA seq
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MLKISTVKENCFPAMYQRGKRIAEEKAYKSFLIEEISEDTKEVSAQVKGSGSKWYDVTVT
FDAHDDITDYVCDCPAYGNYFGMCKHCVALALAYRDTQKPPERQEIVDFPVRGPRKRETS
DTLKNTIAKYAVRNNAYLLGEYYGQIRLEPVITSSYNSYHIEFKIGTRKLYVLKNICKML
DSVEYGKYDSYGKNLGFIHDRSAFTPEALTWIDLLSDYLKTQYNNLEFSSQVYSSSFRSI
SLNSYGIDKVLQKYMDQTIEIDGTPYQVRRGNPEIKMEIVKTEEQGASIYLHSPKWIKGN
IHDYLQKDGIIYQCTPDFSADMMPIVKALNTDNVQHYAFQSRERSVFLNQEDYTAFCGTL
LPVLEQYADIQMNDIDFDEYQPKEAECSVYLSIDEEYRDAIRMRAEAVYGNTVYDLFAEI
EPASQYRDVQREDALKKCLEVYFDMEEKNGEIYGICVKEEKIYDLLEQGFPKIRELAALF
VDDKIKRMRILPAPKVNIGIGMSGDLLDLDIRVEDMDLREMEQILSGYRRRRKYYRLKNG
DFISLEDNGLSLISELSQGLGFDKNDFAKGSFTAPKYRASYIAETLKAQPGKVDARRSPE
FKRLIREMNSYQDNDFEIPEELKAELREYQKNGFRWLAMLSQWGFGGILADDMGLGKTLQ
VITLLEMKKEGALIVCPASLVYNWESELGRFAPDLSVAVAVGSSQQREEIIKSASGSDIL
VTSYDLLKRDAELYKGRTFPYMVIDEAQYIKNAGTQTAKAVKQVQAVHRLALTGTPIENR
LSDLWSIFDFIMPGYLYSYKKFREELEQPIVQNEDKNVMERLKHMVNPFILRRKKQDVLK
DLPDKLEKTVYVKMEEEQKKIYDARVARLQMELSSQSEEDYKNQRIKYLAELMGLRQICC
SPQLCYENYRGGSAKQESCVELVRDLVQAEHRILLFSQFTTMLELLAGEFDKAGISYLYL
SGKNTKEQRREMVKKFQNKEAQVFLISLKAGGTGLNLTEADVVIHYDPWWNVAAQNQATD
RTHRIGQENIVTVIKMVVKNTIEERILALQEKKARLAENVMEGQAVADHRISREELLELI
K
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagatcagcacggtcaaagaaaactgctttccggcaatgtatcagcgggggaag
cggattgccgaggaaaaggcctacaaaagtttcctgatcgaggaaatttcagaggataca
aaagaagtgagtgcacaggtaaagggcagtggcagcaaatggtatgatgtgacagtaacc
tttgacgcccatgatgatattacggactatgtatgtgactgtccggcatatggcaattac
tttggcatgtgcaagcactgtgtagctctggccctcgcctaccgggacacccaaaagccc
ccggagcgtcaggaaatcgtggactttcccgtgagaggccccagaaaacgcgaaacatca
gatacgctgaaaaataccatagcaaagtatgctgtgcgcaataatgcctatctgttgggg
gaatattacggtcagatccgtctggaaccggtcatcacatcctcatacaattcctaccat
atagagtttaaaataggtacacgaaaactgtatgtcctgaaaaacatatgtaaaatgctg
gacagtgtggaatacggtaaatatgattcgtacggcaaaaatctggggtttatccatgac
cgctccgcatttaccccagaagccctcacctggatcgatcttctgtctgattatttgaaa
acccagtataataatctggaattcagttcccaggtgtacagctccagcttccgcagcatt
tcactgaacagctacggaatagacaaagtactgcaaaaatatatggaccagaccattgag
atagacggaaccccttatcaggtcagacgcggcaatccggagatcaagatggaaatcgtt
aaaacagaggagcagggagccagcatttatctgcattcccctaagtggataaaaggaaat
attcacgattatcttcagaaagacggtattatttaccagtgcacacctgacttttcagcg
gatatgatgcccattgtcaaagccctgaacacggataatgtacagcattatgcatttcag
tccagggagcgttccgtttttctgaatcaggaggactataccgcgttctgcgggacactg
ctgcctgttttggaacagtatgcggatattcagatgaacgatattgattttgatgagtat
cagcccaaagaggccgagtgcagtgtgtacttaagcatagatgaagaataccgggatgcc
attcggatgcgggcggaggcagtctatggaaatacagtctatgatctgttcgcagagata
gaaccggccagtcagtaccgtgacgtgcagagggaagacgctctgaaaaaatgtctggaa
gtatattttgacatggaagagaagaacggggaaatctatgggatttgtgtaaaagaggaa
aaaatatatgatcttctggaacagggatttcccaagatccgtgaactggcagcccttttt
gtggatgacaagataaagagaatgcggattctccccgccccgaaagtcaacatcggcata
ggcatgtccggagatctgctggatctggatatccgggtggaagatatggatctgcgggag
atggagcagatcctatccggataccgcaggcggagaaagtattaccgcctgaaaaatggg
gatttcatcagtcttgaggacaatggcctttctctcatatctgagctgtcccaggggctt
gggtttgacaaaaatgatttcgccaaaggcagctttactgctcccaagtaccgggcttcc
tacatagcggagaccctgaaagcacagccgggcaaggtggatgccagaagaagtccggaa
ttcaaacggctcatccgtgagatgaacagctatcaggacaatgattttgagattcccgag
gaacttaaggcagaactcagggaatatcagaagaacggcttccgctggctggccatgctg
tcccagtggggattcgggggaatcctggcggatgatatgggacttggaaagactcttcag
gttatcacactgttggaaatgaaaaaagagggcgccctcatcgtgtgcccggcatctctg
gtctataactgggagagcgagcttggccggttcgcgccggacctttctgtcgcagtggct
gtgggcagcagtcagcagagagaggagatcataaaaagtgcatctggatcggatatactg
gtgacttcctatgatctgttgaagcgggatgcggagctgtataaagggagaacctttccc
tatatggtcatagatgaggctcaatatattaaaaacgcaggtacccagacggcaaaagcg
gtgaagcaagtgcaggctgtccaccgtcttgcgctgacgggaactcctatagagaaccgc
ctcagtgacttgtggagtatatttgactttatcatgccgggatatctctatagctacaaa
aagttccgggaagagctggaacagcccattgtacagaatgaggacaaaaatgtcatggaa
cggctgaagcatatggtgaatccttttatcctgcgccggaagaaacaggatgtgctcaaa
gacctgccggacaagctggagaagaccgtctatgtgaagatggaggaggaacagaaaaag
atctacgacgccagagtcgccaggctgcagatggaattaagcagccagagcgaggaggat
tacaagaaccagcgcataaagtatctggcggagctgatggggctgcggcagatctgctgt
tctcctcagctttgctatgaaaattacaggggaggttccgcaaaacaggaaagctgtgtg
gaactggtccgagacctggtgcaggcagaacacaggatactgcttttttcccagtttacc
acaatgctggagcttttggccggggagtttgacaaggcggggatttcttatctctatctc
tccgggaagaataccaaagagcagagacgggaaatggtgaaaaagtttcagaacaaagag
gctcaggttttccttatttccctgaaagcaggaggaacagggctgaatctgacggaggcg
gatgtggtcatacattacgatccctggtggaacgtggcagcccagaaccaggccacagac
cgtacccaccgcatcggacaggagaatatcgtcaccgtcataaaaatggtggtgaagaat
accatagaagagaggatactggcccttcaggagaagaaagcccgtcttgcggaaaatgtc
atggaaggacaggcagtggctgaccacaggatcagcagggaggagcttctggaactgata
aaatag
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